Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17587 | 52984;52985;52986 | chr2:178608028;178608027;178608026 | chr2:179472755;179472754;179472753 |
N2AB | 15946 | 48061;48062;48063 | chr2:178608028;178608027;178608026 | chr2:179472755;179472754;179472753 |
N2A | 15019 | 45280;45281;45282 | chr2:178608028;178608027;178608026 | chr2:179472755;179472754;179472753 |
N2B | 8522 | 25789;25790;25791 | chr2:178608028;178608027;178608026 | chr2:179472755;179472754;179472753 |
Novex-1 | 8647 | 26164;26165;26166 | chr2:178608028;178608027;178608026 | chr2:179472755;179472754;179472753 |
Novex-2 | 8714 | 26365;26366;26367 | chr2:178608028;178608027;178608026 | chr2:179472755;179472754;179472753 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1271096467 | -1.146 | 0.22 | N | 0.421 | 0.239 | 0.222439326576 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14732E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1271096467 | -1.146 | 0.22 | N | 0.421 | 0.239 | 0.222439326576 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1271096467 | -1.146 | 0.22 | N | 0.421 | 0.239 | 0.222439326576 | gnomAD-4.0.0 | 6.58068E-06 | None | None | None | None | N | None | 2.41476E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1423 | likely_benign | 0.1263 | benign | -0.387 | Destabilizing | 0.22 | N | 0.475 | neutral | N | 0.422531122 | None | None | N |
E/C | 0.7557 | likely_pathogenic | 0.7107 | pathogenic | -0.128 | Destabilizing | 0.968 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/D | 0.1441 | likely_benign | 0.1137 | benign | -1.097 | Destabilizing | None | N | 0.215 | neutral | N | 0.376721475 | None | None | N |
E/F | 0.6737 | likely_pathogenic | 0.6207 | pathogenic | -0.605 | Destabilizing | 0.89 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/G | 0.21 | likely_benign | 0.1837 | benign | -0.683 | Destabilizing | 0.22 | N | 0.541 | neutral | N | 0.463801742 | None | None | N |
E/H | 0.3987 | ambiguous | 0.3471 | ambiguous | -0.99 | Destabilizing | 0.726 | D | 0.513 | neutral | None | None | None | None | N |
E/I | 0.294 | likely_benign | 0.2658 | benign | 0.387 | Stabilizing | 0.726 | D | 0.747 | deleterious | None | None | None | None | N |
E/K | 0.1749 | likely_benign | 0.1539 | benign | -0.201 | Destabilizing | 0.22 | N | 0.421 | neutral | N | 0.422531122 | None | None | N |
E/L | 0.3108 | likely_benign | 0.2869 | benign | 0.387 | Stabilizing | 0.567 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/M | 0.38 | ambiguous | 0.3502 | ambiguous | 0.788 | Stabilizing | 0.968 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/N | 0.2438 | likely_benign | 0.1918 | benign | -0.445 | Destabilizing | 0.157 | N | 0.413 | neutral | None | None | None | None | N |
E/P | 0.916 | likely_pathogenic | 0.9087 | pathogenic | 0.152 | Stabilizing | 0.726 | D | 0.579 | neutral | None | None | None | None | N |
E/Q | 0.131 | likely_benign | 0.1182 | benign | -0.382 | Destabilizing | 0.22 | N | 0.449 | neutral | N | 0.42651279 | None | None | N |
E/R | 0.2772 | likely_benign | 0.2474 | benign | -0.265 | Destabilizing | 0.567 | D | 0.487 | neutral | None | None | None | None | N |
E/S | 0.1667 | likely_benign | 0.1452 | benign | -0.736 | Destabilizing | 0.157 | N | 0.417 | neutral | None | None | None | None | N |
E/T | 0.1513 | likely_benign | 0.136 | benign | -0.491 | Destabilizing | 0.272 | N | 0.503 | neutral | None | None | None | None | N |
E/V | 0.1776 | likely_benign | 0.164 | benign | 0.152 | Stabilizing | 0.667 | D | 0.612 | neutral | N | 0.393400294 | None | None | N |
E/W | 0.8808 | likely_pathogenic | 0.8514 | pathogenic | -0.659 | Destabilizing | 0.968 | D | 0.694 | prob.neutral | None | None | None | None | N |
E/Y | 0.5814 | likely_pathogenic | 0.5256 | ambiguous | -0.391 | Destabilizing | 0.89 | D | 0.691 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.