Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17592 | 52999;53000;53001 | chr2:178608013;178608012;178608011 | chr2:179472740;179472739;179472738 |
N2AB | 15951 | 48076;48077;48078 | chr2:178608013;178608012;178608011 | chr2:179472740;179472739;179472738 |
N2A | 15024 | 45295;45296;45297 | chr2:178608013;178608012;178608011 | chr2:179472740;179472739;179472738 |
N2B | 8527 | 25804;25805;25806 | chr2:178608013;178608012;178608011 | chr2:179472740;179472739;179472738 |
Novex-1 | 8652 | 26179;26180;26181 | chr2:178608013;178608012;178608011 | chr2:179472740;179472739;179472738 |
Novex-2 | 8719 | 26380;26381;26382 | chr2:178608013;178608012;178608011 | chr2:179472740;179472739;179472738 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs541127460 | None | 0.767 | N | 0.419 | 0.301 | 0.236890367714 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 2.88351E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/A | rs541127460 | None | 0.767 | N | 0.419 | 0.301 | 0.236890367714 | gnomAD-4.0.0 | 6.57912E-06 | None | None | None | None | N | None | 0 | 0 | None | 2.88351E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/H | None | None | 1.0 | N | 0.821 | 0.483 | 0.691146523942 | gnomAD-4.0.0 | 6.84579E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.53331E-05 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs1559744241 | None | 0.999 | N | 0.795 | 0.442 | 0.807022764505 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
P/L | rs1559744241 | None | 0.999 | N | 0.795 | 0.442 | 0.807022764505 | gnomAD-4.0.0 | 1.36916E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79954E-06 | 0 | 0 |
P/S | None | None | 0.998 | N | 0.768 | 0.377 | 0.366848117066 | gnomAD-4.0.0 | 6.84586E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65821E-05 |
P/T | rs541127460 | -1.59 | 0.999 | N | 0.782 | 0.39 | 0.531581166724 | gnomAD-2.1.1 | 2.42E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.65E-05 | None | 1.63431E-04 | None | 0 | 0 | 0 |
P/T | rs541127460 | -1.59 | 0.999 | N | 0.782 | 0.39 | 0.531581166724 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
P/T | rs541127460 | -1.59 | 0.999 | N | 0.782 | 0.39 | 0.531581166724 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
P/T | rs541127460 | -1.59 | 0.999 | N | 0.782 | 0.39 | 0.531581166724 | gnomAD-4.0.0 | 1.17804E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.97663E-04 | 1.60205E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0896 | likely_benign | 0.0835 | benign | -1.9 | Destabilizing | 0.767 | D | 0.419 | neutral | N | 0.511230329 | None | None | N |
P/C | 0.6627 | likely_pathogenic | 0.5843 | pathogenic | -1.348 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
P/D | 0.6456 | likely_pathogenic | 0.6081 | pathogenic | -2.186 | Highly Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
P/E | 0.3534 | ambiguous | 0.3333 | benign | -2.066 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
P/F | 0.6616 | likely_pathogenic | 0.5819 | pathogenic | -1.257 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
P/G | 0.5422 | ambiguous | 0.5026 | ambiguous | -2.31 | Highly Destabilizing | 0.997 | D | 0.749 | deleterious | None | None | None | None | N |
P/H | 0.3815 | ambiguous | 0.346 | ambiguous | -1.744 | Destabilizing | 1.0 | D | 0.821 | deleterious | N | 0.509270178 | None | None | N |
P/I | 0.3248 | likely_benign | 0.2896 | benign | -0.806 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
P/K | 0.3978 | ambiguous | 0.3785 | ambiguous | -1.773 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
P/L | 0.1496 | likely_benign | 0.135 | benign | -0.806 | Destabilizing | 0.999 | D | 0.795 | deleterious | N | 0.520119504 | None | None | N |
P/M | 0.3277 | likely_benign | 0.2956 | benign | -0.728 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
P/N | 0.5696 | likely_pathogenic | 0.5207 | ambiguous | -1.815 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
P/Q | 0.2376 | likely_benign | 0.2238 | benign | -1.837 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
P/R | 0.3399 | likely_benign | 0.3085 | benign | -1.333 | Destabilizing | 0.999 | D | 0.831 | deleterious | D | 0.526413213 | None | None | N |
P/S | 0.2211 | likely_benign | 0.1988 | benign | -2.339 | Highly Destabilizing | 0.998 | D | 0.768 | deleterious | N | 0.491468638 | None | None | N |
P/T | 0.1717 | likely_benign | 0.1537 | benign | -2.092 | Highly Destabilizing | 0.999 | D | 0.782 | deleterious | N | 0.489088781 | None | None | N |
P/V | 0.2204 | likely_benign | 0.2004 | benign | -1.142 | Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | N |
P/W | 0.8492 | likely_pathogenic | 0.8037 | pathogenic | -1.552 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
P/Y | 0.6305 | likely_pathogenic | 0.5687 | pathogenic | -1.237 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.