Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17600 | 53023;53024;53025 | chr2:178607989;178607988;178607987 | chr2:179472716;179472715;179472714 |
N2AB | 15959 | 48100;48101;48102 | chr2:178607989;178607988;178607987 | chr2:179472716;179472715;179472714 |
N2A | 15032 | 45319;45320;45321 | chr2:178607989;178607988;178607987 | chr2:179472716;179472715;179472714 |
N2B | 8535 | 25828;25829;25830 | chr2:178607989;178607988;178607987 | chr2:179472716;179472715;179472714 |
Novex-1 | 8660 | 26203;26204;26205 | chr2:178607989;178607988;178607987 | chr2:179472716;179472715;179472714 |
Novex-2 | 8727 | 26404;26405;26406 | chr2:178607989;178607988;178607987 | chr2:179472716;179472715;179472714 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs745629273 | 0.811 | 0.822 | N | 0.621 | 0.32 | 0.26547132957 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/K | rs745629273 | 0.811 | 0.822 | N | 0.621 | 0.32 | 0.26547132957 | gnomAD-4.0.0 | 2.05356E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79952E-06 | 0 | 1.65777E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1897 | likely_benign | 0.1947 | benign | -0.058 | Destabilizing | 0.822 | D | 0.655 | neutral | N | 0.482907578 | None | None | I |
E/C | 0.8118 | likely_pathogenic | 0.8056 | pathogenic | -0.079 | Destabilizing | 0.998 | D | 0.747 | deleterious | None | None | None | None | I |
E/D | 0.0694 | likely_benign | 0.0684 | benign | -0.208 | Destabilizing | 0.006 | N | 0.197 | neutral | N | 0.467572766 | None | None | I |
E/F | 0.7616 | likely_pathogenic | 0.74 | pathogenic | -0.051 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | I |
E/G | 0.2288 | likely_benign | 0.2217 | benign | -0.197 | Destabilizing | 0.822 | D | 0.596 | neutral | N | 0.482158216 | None | None | I |
E/H | 0.4677 | ambiguous | 0.4753 | ambiguous | 0.465 | Stabilizing | 0.998 | D | 0.647 | neutral | None | None | None | None | I |
E/I | 0.3714 | ambiguous | 0.3542 | ambiguous | 0.253 | Stabilizing | 0.978 | D | 0.727 | prob.delet. | None | None | None | None | I |
E/K | 0.1881 | likely_benign | 0.1871 | benign | 0.486 | Stabilizing | 0.822 | D | 0.621 | neutral | N | 0.487235962 | None | None | I |
E/L | 0.4412 | ambiguous | 0.4146 | ambiguous | 0.253 | Stabilizing | 0.978 | D | 0.727 | prob.delet. | None | None | None | None | I |
E/M | 0.5062 | ambiguous | 0.478 | ambiguous | 0.096 | Stabilizing | 0.998 | D | 0.706 | prob.neutral | None | None | None | None | I |
E/N | 0.1717 | likely_benign | 0.173 | benign | 0.238 | Stabilizing | 0.754 | D | 0.617 | neutral | None | None | None | None | I |
E/P | 0.4096 | ambiguous | 0.4313 | ambiguous | 0.168 | Stabilizing | 0.978 | D | 0.68 | prob.neutral | None | None | None | None | I |
E/Q | 0.1845 | likely_benign | 0.1842 | benign | 0.254 | Stabilizing | 0.971 | D | 0.601 | neutral | N | 0.516481434 | None | None | I |
E/R | 0.3218 | likely_benign | 0.3277 | benign | 0.709 | Stabilizing | 0.978 | D | 0.675 | neutral | None | None | None | None | I |
E/S | 0.2094 | likely_benign | 0.2203 | benign | 0.081 | Stabilizing | 0.86 | D | 0.62 | neutral | None | None | None | None | I |
E/T | 0.2551 | likely_benign | 0.2545 | benign | 0.2 | Stabilizing | 0.956 | D | 0.612 | neutral | None | None | None | None | I |
E/V | 0.232 | likely_benign | 0.2249 | benign | 0.168 | Stabilizing | 0.971 | D | 0.703 | prob.neutral | N | 0.475549521 | None | None | I |
E/W | 0.898 | likely_pathogenic | 0.8887 | pathogenic | 0.022 | Stabilizing | 0.998 | D | 0.749 | deleterious | None | None | None | None | I |
E/Y | 0.5745 | likely_pathogenic | 0.5546 | ambiguous | 0.184 | Stabilizing | 0.993 | D | 0.696 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.