Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17601 | 53026;53027;53028 | chr2:178607986;178607985;178607984 | chr2:179472713;179472712;179472711 |
N2AB | 15960 | 48103;48104;48105 | chr2:178607986;178607985;178607984 | chr2:179472713;179472712;179472711 |
N2A | 15033 | 45322;45323;45324 | chr2:178607986;178607985;178607984 | chr2:179472713;179472712;179472711 |
N2B | 8536 | 25831;25832;25833 | chr2:178607986;178607985;178607984 | chr2:179472713;179472712;179472711 |
Novex-1 | 8661 | 26206;26207;26208 | chr2:178607986;178607985;178607984 | chr2:179472713;179472712;179472711 |
Novex-2 | 8728 | 26407;26408;26409 | chr2:178607986;178607985;178607984 | chr2:179472713;179472712;179472711 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs774032287 | -2.06 | 0.978 | N | 0.762 | 0.511 | None | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 0 |
I/T | rs774032287 | -2.06 | 0.978 | N | 0.762 | 0.511 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/T | rs774032287 | -2.06 | 0.978 | N | 0.762 | 0.511 | None | gnomAD-4.0.0 | 6.82059E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.32731E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9095 | likely_pathogenic | 0.8828 | pathogenic | -1.97 | Destabilizing | 0.983 | D | 0.655 | neutral | None | None | None | None | I |
I/C | 0.9711 | likely_pathogenic | 0.9696 | pathogenic | -1.146 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
I/D | 0.9941 | likely_pathogenic | 0.9929 | pathogenic | -1.462 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | I |
I/E | 0.9846 | likely_pathogenic | 0.9835 | pathogenic | -1.413 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | I |
I/F | 0.8597 | likely_pathogenic | 0.8156 | pathogenic | -1.303 | Destabilizing | 0.997 | D | 0.724 | prob.delet. | D | 0.522068061 | None | None | I |
I/G | 0.9884 | likely_pathogenic | 0.9858 | pathogenic | -2.35 | Highly Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | I |
I/H | 0.9922 | likely_pathogenic | 0.9907 | pathogenic | -1.504 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
I/K | 0.9786 | likely_pathogenic | 0.978 | pathogenic | -1.435 | Destabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | I |
I/L | 0.4035 | ambiguous | 0.4067 | ambiguous | -0.966 | Destabilizing | 0.798 | D | 0.4 | neutral | D | 0.528509368 | None | None | I |
I/M | 0.4426 | ambiguous | 0.402 | ambiguous | -0.707 | Destabilizing | 0.997 | D | 0.686 | prob.neutral | D | 0.524602956 | None | None | I |
I/N | 0.9218 | likely_pathogenic | 0.9108 | pathogenic | -1.298 | Destabilizing | 0.999 | D | 0.825 | deleterious | D | 0.525616914 | None | None | I |
I/P | 0.924 | likely_pathogenic | 0.9245 | pathogenic | -1.271 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | I |
I/Q | 0.9836 | likely_pathogenic | 0.983 | pathogenic | -1.423 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | I |
I/R | 0.9729 | likely_pathogenic | 0.9721 | pathogenic | -0.83 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | I |
I/S | 0.9529 | likely_pathogenic | 0.943 | pathogenic | -1.952 | Destabilizing | 0.997 | D | 0.796 | deleterious | D | 0.536377335 | None | None | I |
I/T | 0.7945 | likely_pathogenic | 0.7534 | pathogenic | -1.778 | Destabilizing | 0.978 | D | 0.762 | deleterious | N | 0.51350014 | None | None | I |
I/V | 0.1353 | likely_benign | 0.1175 | benign | -1.271 | Destabilizing | 0.198 | N | 0.223 | neutral | N | 0.490201696 | None | None | I |
I/W | 0.9941 | likely_pathogenic | 0.9923 | pathogenic | -1.416 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
I/Y | 0.975 | likely_pathogenic | 0.9687 | pathogenic | -1.208 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.