Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17607 | 53044;53045;53046 | chr2:178607968;178607967;178607966 | chr2:179472695;179472694;179472693 |
N2AB | 15966 | 48121;48122;48123 | chr2:178607968;178607967;178607966 | chr2:179472695;179472694;179472693 |
N2A | 15039 | 45340;45341;45342 | chr2:178607968;178607967;178607966 | chr2:179472695;179472694;179472693 |
N2B | 8542 | 25849;25850;25851 | chr2:178607968;178607967;178607966 | chr2:179472695;179472694;179472693 |
Novex-1 | 8667 | 26224;26225;26226 | chr2:178607968;178607967;178607966 | chr2:179472695;179472694;179472693 |
Novex-2 | 8734 | 26425;26426;26427 | chr2:178607968;178607967;178607966 | chr2:179472695;179472694;179472693 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | rs1381094642 | -0.903 | 0.638 | N | 0.799 | 0.248 | 0.203808441222 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2949 | likely_benign | 0.3047 | benign | -2.122 | Highly Destabilizing | 0.334 | N | 0.705 | prob.neutral | N | 0.48096389 | None | None | N |
D/C | 0.5102 | ambiguous | 0.52 | ambiguous | -1.26 | Destabilizing | 0.982 | D | 0.799 | deleterious | None | None | None | None | N |
D/E | 0.2186 | likely_benign | 0.2239 | benign | -0.863 | Destabilizing | 0.504 | D | 0.626 | neutral | N | 0.347838576 | None | None | N |
D/F | 0.2969 | likely_benign | 0.2872 | benign | -2.104 | Highly Destabilizing | 0.539 | D | 0.773 | deleterious | None | None | None | None | N |
D/G | 0.4058 | ambiguous | 0.4074 | ambiguous | -2.454 | Highly Destabilizing | 0.504 | D | 0.693 | prob.neutral | D | 0.522540614 | None | None | N |
D/H | 0.2036 | likely_benign | 0.2139 | benign | -1.924 | Destabilizing | 0.638 | D | 0.799 | deleterious | N | 0.514209133 | None | None | N |
D/I | 0.5757 | likely_pathogenic | 0.5421 | ambiguous | -1.188 | Destabilizing | 0.7 | D | 0.802 | deleterious | None | None | None | None | N |
D/K | 0.6227 | likely_pathogenic | 0.6454 | pathogenic | -1.907 | Destabilizing | 0.7 | D | 0.768 | deleterious | None | None | None | None | N |
D/L | 0.4487 | ambiguous | 0.4474 | ambiguous | -1.188 | Destabilizing | 0.539 | D | 0.76 | deleterious | None | None | None | None | N |
D/M | 0.7065 | likely_pathogenic | 0.6746 | pathogenic | -0.428 | Destabilizing | 0.947 | D | 0.804 | deleterious | None | None | None | None | N |
D/N | 0.1616 | likely_benign | 0.1526 | benign | -1.85 | Destabilizing | 0.781 | D | 0.771 | deleterious | N | 0.482484827 | None | None | N |
D/P | 0.9871 | likely_pathogenic | 0.9874 | pathogenic | -1.485 | Destabilizing | 0.935 | D | 0.795 | deleterious | None | None | None | None | N |
D/Q | 0.3921 | ambiguous | 0.4015 | ambiguous | -1.626 | Destabilizing | 0.826 | D | 0.809 | deleterious | None | None | None | None | N |
D/R | 0.5946 | likely_pathogenic | 0.6075 | pathogenic | -1.709 | Destabilizing | 0.7 | D | 0.803 | deleterious | None | None | None | None | N |
D/S | 0.1765 | likely_benign | 0.1838 | benign | -2.605 | Highly Destabilizing | 0.399 | N | 0.727 | prob.delet. | None | None | None | None | N |
D/T | 0.4245 | ambiguous | 0.4253 | ambiguous | -2.286 | Highly Destabilizing | 0.7 | D | 0.759 | deleterious | None | None | None | None | N |
D/V | 0.375 | ambiguous | 0.3468 | ambiguous | -1.485 | Destabilizing | 0.638 | D | 0.773 | deleterious | N | 0.470203469 | None | None | N |
D/W | 0.7354 | likely_pathogenic | 0.7155 | pathogenic | -2.139 | Highly Destabilizing | 0.947 | D | 0.804 | deleterious | None | None | None | None | N |
D/Y | 0.0716 | likely_benign | 0.075 | benign | -1.945 | Destabilizing | 0.002 | N | 0.614 | neutral | N | 0.463108309 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.