Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17614 | 53065;53066;53067 | chr2:178607947;178607946;178607945 | chr2:179472674;179472673;179472672 |
N2AB | 15973 | 48142;48143;48144 | chr2:178607947;178607946;178607945 | chr2:179472674;179472673;179472672 |
N2A | 15046 | 45361;45362;45363 | chr2:178607947;178607946;178607945 | chr2:179472674;179472673;179472672 |
N2B | 8549 | 25870;25871;25872 | chr2:178607947;178607946;178607945 | chr2:179472674;179472673;179472672 |
Novex-1 | 8674 | 26245;26246;26247 | chr2:178607947;178607946;178607945 | chr2:179472674;179472673;179472672 |
Novex-2 | 8741 | 26446;26447;26448 | chr2:178607947;178607946;178607945 | chr2:179472674;179472673;179472672 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.801 | N | 0.271 | 0.199 | 0.16115917748 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
N/S | rs1162109348 | 0.235 | 0.136 | N | 0.137 | 0.17 | 0.128392430309 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
N/S | rs1162109348 | 0.235 | 0.136 | N | 0.137 | 0.17 | 0.128392430309 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/S | rs1162109348 | 0.235 | 0.136 | N | 0.137 | 0.17 | 0.128392430309 | gnomAD-4.0.0 | 6.5825E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47241E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.137 | likely_benign | 0.1271 | benign | -0.091 | Destabilizing | 0.525 | D | 0.263 | neutral | None | None | None | None | N |
N/C | 0.3064 | likely_benign | 0.2757 | benign | 0.108 | Stabilizing | 0.998 | D | 0.236 | neutral | None | None | None | None | N |
N/D | 0.0994 | likely_benign | 0.0918 | benign | -0.004 | Destabilizing | 0.801 | D | 0.271 | neutral | N | 0.418896171 | None | None | N |
N/E | 0.1918 | likely_benign | 0.1745 | benign | -0.074 | Destabilizing | 0.525 | D | 0.261 | neutral | None | None | None | None | N |
N/F | 0.5408 | ambiguous | 0.5034 | ambiguous | -0.72 | Destabilizing | 0.974 | D | 0.23 | neutral | None | None | None | None | N |
N/G | 0.1767 | likely_benign | 0.1583 | benign | -0.161 | Destabilizing | 0.688 | D | 0.267 | neutral | None | None | None | None | N |
N/H | 0.1121 | likely_benign | 0.1033 | benign | -0.179 | Destabilizing | 0.028 | N | 0.162 | neutral | N | 0.466380687 | None | None | N |
N/I | 0.2277 | likely_benign | 0.2288 | benign | -0.006 | Destabilizing | 0.966 | D | 0.246 | neutral | N | 0.469978353 | None | None | N |
N/K | 0.1335 | likely_benign | 0.1281 | benign | 0.068 | Stabilizing | 0.002 | N | 0.083 | neutral | N | 0.384628882 | None | None | N |
N/L | 0.1968 | likely_benign | 0.1972 | benign | -0.006 | Destabilizing | 0.842 | D | 0.259 | neutral | None | None | None | None | N |
N/M | 0.2795 | likely_benign | 0.2669 | benign | 0.067 | Stabilizing | 0.991 | D | 0.209 | neutral | None | None | None | None | N |
N/P | 0.3295 | likely_benign | 0.3286 | benign | -0.013 | Destabilizing | 0.974 | D | 0.248 | neutral | None | None | None | None | N |
N/Q | 0.2041 | likely_benign | 0.1863 | benign | -0.261 | Destabilizing | 0.842 | D | 0.207 | neutral | None | None | None | None | N |
N/R | 0.1807 | likely_benign | 0.1684 | benign | 0.151 | Stabilizing | 0.728 | D | 0.223 | neutral | None | None | None | None | N |
N/S | 0.067 | likely_benign | 0.0664 | benign | -0.039 | Destabilizing | 0.136 | N | 0.137 | neutral | N | 0.41354628 | None | None | N |
N/T | 0.0938 | likely_benign | 0.0961 | benign | -0.009 | Destabilizing | 0.669 | D | 0.243 | neutral | N | 0.439135371 | None | None | N |
N/V | 0.1891 | likely_benign | 0.1899 | benign | -0.013 | Destabilizing | 0.915 | D | 0.261 | neutral | None | None | None | None | N |
N/W | 0.6853 | likely_pathogenic | 0.6426 | pathogenic | -0.871 | Destabilizing | 0.998 | D | 0.324 | neutral | None | None | None | None | N |
N/Y | 0.1968 | likely_benign | 0.188 | benign | -0.545 | Destabilizing | 0.934 | D | 0.233 | neutral | N | 0.457414487 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.