Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1761853077;53078;53079 chr2:178607935;178607934;178607933chr2:179472662;179472661;179472660
N2AB1597748154;48155;48156 chr2:178607935;178607934;178607933chr2:179472662;179472661;179472660
N2A1505045373;45374;45375 chr2:178607935;178607934;178607933chr2:179472662;179472661;179472660
N2B855325882;25883;25884 chr2:178607935;178607934;178607933chr2:179472662;179472661;179472660
Novex-1867826257;26258;26259 chr2:178607935;178607934;178607933chr2:179472662;179472661;179472660
Novex-2874526458;26459;26460 chr2:178607935;178607934;178607933chr2:179472662;179472661;179472660
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGC
  • RefSeq wild type template codon: GCG
  • Domain: Fn3-16
  • Domain position: 50
  • Structural Position: 67
  • Q(SASA): 0.4502
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs201213901 -0.506 1.0 N 0.743 0.494 None gnomAD-2.1.1 1.00373E-03 None None None None N None 4.13565E-04 5.66E-05 None 9.67E-05 0 None 0 None 4.39683E-04 1.95361E-03 9.82594E-04
R/C rs201213901 -0.506 1.0 N 0.743 0.494 None gnomAD-3.1.2 8.29723E-04 None None None None N None 3.14025E-04 6.57E-05 0 5.77034E-04 0 None 4.71965E-04 0 1.54639E-03 0 0
R/C rs201213901 -0.506 1.0 N 0.743 0.494 None 1000 genomes 1.99681E-04 None None None None N None 0 0 None None 0 1E-03 None None None 0 None
R/C rs201213901 -0.506 1.0 N 0.743 0.494 None gnomAD-4.0.0 1.32556E-03 None None None None N None 2.93545E-04 3.33589E-05 None 2.02867E-04 0 None 4.84466E-04 0 1.72141E-03 0 7.52795E-04
R/H rs371538664 -1.41 1.0 N 0.794 0.46 None gnomAD-2.1.1 1.8931E-04 None None None None N None 4.14E-05 2.83E-05 None 3.57695E-03 1.54767E-04 None 0 None 0 7.03E-05 2.8082E-04
R/H rs371538664 -1.41 1.0 N 0.794 0.46 None gnomAD-3.1.2 1.5803E-04 None None None None N None 0 0 0 5.48182E-03 1.95084E-04 None 0 0 5.89E-05 0 0
R/H rs371538664 -1.41 1.0 N 0.794 0.46 None gnomAD-4.0.0 1.34549E-04 None None None None N None 1.33629E-05 3.33712E-05 None 4.22611E-03 2.01234E-04 None 0 4.93746E-04 5.25751E-05 0 2.40323E-04
R/S rs201213901 -0.647 1.0 N 0.744 0.384 0.386234084001 gnomAD-2.1.1 4.02E-06 None None None None N None 0 0 None 0 0 None 0 None 0 8.88E-06 0
R/S rs201213901 -0.647 1.0 N 0.744 0.384 0.386234084001 gnomAD-3.1.2 6.59E-06 None None None None N None 0 0 0 0 0 None 0 0 1.47E-05 0 0
R/S rs201213901 -0.647 1.0 N 0.744 0.384 0.386234084001 gnomAD-4.0.0 1.05408E-05 None None None None N None 0 0 None 0 0 None 0 0 1.18717E-05 0 4.80677E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.8448 likely_pathogenic 0.7875 pathogenic -1.057 Destabilizing 0.999 D 0.651 neutral None None None None N
R/C 0.3775 ambiguous 0.2936 benign -0.963 Destabilizing 1.0 D 0.743 deleterious N 0.489917567 None None N
R/D 0.972 likely_pathogenic 0.953 pathogenic -0.186 Destabilizing 1.0 D 0.754 deleterious None None None None N
R/E 0.8171 likely_pathogenic 0.7448 pathogenic -0.079 Destabilizing 0.999 D 0.695 prob.neutral None None None None N
R/F 0.9145 likely_pathogenic 0.8687 pathogenic -1.051 Destabilizing 1.0 D 0.729 prob.delet. None None None None N
R/G 0.8169 likely_pathogenic 0.7246 pathogenic -1.339 Destabilizing 1.0 D 0.672 neutral N 0.474179942 None None N
R/H 0.2178 likely_benign 0.1735 benign -1.666 Destabilizing 1.0 D 0.794 deleterious N 0.475265897 None None N
R/I 0.6972 likely_pathogenic 0.6143 pathogenic -0.302 Destabilizing 1.0 D 0.747 deleterious None None None None N
R/K 0.2096 likely_benign 0.1882 benign -1.031 Destabilizing 0.998 D 0.558 neutral None None None None N
R/L 0.6161 likely_pathogenic 0.5392 ambiguous -0.302 Destabilizing 1.0 D 0.672 neutral N 0.503589494 None None N
R/M 0.7783 likely_pathogenic 0.6987 pathogenic -0.482 Destabilizing 1.0 D 0.777 deleterious None None None None N
R/N 0.9322 likely_pathogenic 0.9012 pathogenic -0.416 Destabilizing 1.0 D 0.781 deleterious None None None None N
R/P 0.79 likely_pathogenic 0.714 pathogenic -0.534 Destabilizing 1.0 D 0.741 deleterious N 0.478019046 None None N
R/Q 0.2322 likely_benign 0.1877 benign -0.665 Destabilizing 1.0 D 0.773 deleterious None None None None N
R/S 0.9016 likely_pathogenic 0.8589 pathogenic -1.252 Destabilizing 1.0 D 0.744 deleterious N 0.501682552 None None N
R/T 0.7315 likely_pathogenic 0.6628 pathogenic -0.971 Destabilizing 1.0 D 0.739 prob.delet. None None None None N
R/V 0.764 likely_pathogenic 0.6868 pathogenic -0.534 Destabilizing 1.0 D 0.755 deleterious None None None None N
R/W 0.5675 likely_pathogenic 0.459 ambiguous -0.689 Destabilizing 1.0 D 0.747 deleterious None None None None N
R/Y 0.8143 likely_pathogenic 0.7279 pathogenic -0.396 Destabilizing 1.0 D 0.749 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.