Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17620 | 53083;53084;53085 | chr2:178607929;178607928;178607927 | chr2:179472656;179472655;179472654 |
N2AB | 15979 | 48160;48161;48162 | chr2:178607929;178607928;178607927 | chr2:179472656;179472655;179472654 |
N2A | 15052 | 45379;45380;45381 | chr2:178607929;178607928;178607927 | chr2:179472656;179472655;179472654 |
N2B | 8555 | 25888;25889;25890 | chr2:178607929;178607928;178607927 | chr2:179472656;179472655;179472654 |
Novex-1 | 8680 | 26263;26264;26265 | chr2:178607929;178607928;178607927 | chr2:179472656;179472655;179472654 |
Novex-2 | 8747 | 26464;26465;26466 | chr2:178607929;178607928;178607927 | chr2:179472656;179472655;179472654 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.991 | N | 0.665 | 0.363 | 0.572964795716 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
T/R | rs1559743128 | None | 0.982 | D | 0.649 | 0.338 | 0.71323274049 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.3587 | ambiguous | 0.3485 | ambiguous | -1.023 | Destabilizing | 0.76 | D | 0.484 | neutral | N | 0.477579116 | None | None | N |
T/C | 0.7741 | likely_pathogenic | 0.7533 | pathogenic | -0.575 | Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | N |
T/D | 0.8332 | likely_pathogenic | 0.8296 | pathogenic | -0.8 | Destabilizing | 0.91 | D | 0.563 | neutral | None | None | None | None | N |
T/E | 0.8665 | likely_pathogenic | 0.8428 | pathogenic | -0.644 | Destabilizing | 0.953 | D | 0.571 | neutral | None | None | None | None | N |
T/F | 0.8894 | likely_pathogenic | 0.8613 | pathogenic | -0.714 | Destabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | N |
T/G | 0.5838 | likely_pathogenic | 0.594 | pathogenic | -1.421 | Destabilizing | 0.91 | D | 0.529 | neutral | None | None | None | None | N |
T/H | 0.6993 | likely_pathogenic | 0.6654 | pathogenic | -1.528 | Destabilizing | 0.998 | D | 0.644 | neutral | None | None | None | None | N |
T/I | 0.7609 | likely_pathogenic | 0.7129 | pathogenic | 0.003 | Stabilizing | 0.991 | D | 0.665 | neutral | N | 0.518270945 | None | None | N |
T/K | 0.7993 | likely_pathogenic | 0.7735 | pathogenic | -0.548 | Destabilizing | 0.939 | D | 0.58 | neutral | N | 0.510920898 | None | None | N |
T/L | 0.4984 | ambiguous | 0.4492 | ambiguous | 0.003 | Stabilizing | 0.976 | D | 0.565 | neutral | None | None | None | None | N |
T/M | 0.3699 | ambiguous | 0.3121 | benign | 0.054 | Stabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
T/N | 0.2422 | likely_benign | 0.2837 | benign | -1.007 | Destabilizing | 0.128 | N | 0.375 | neutral | None | None | None | None | N |
T/P | 0.4361 | ambiguous | 0.4521 | ambiguous | -0.306 | Destabilizing | 0.991 | D | 0.668 | neutral | N | 0.475829464 | None | None | N |
T/Q | 0.7438 | likely_pathogenic | 0.7204 | pathogenic | -0.848 | Destabilizing | 0.993 | D | 0.675 | prob.neutral | None | None | None | None | N |
T/R | 0.7325 | likely_pathogenic | 0.715 | pathogenic | -0.662 | Destabilizing | 0.982 | D | 0.649 | neutral | D | 0.523850123 | None | None | N |
T/S | 0.2135 | likely_benign | 0.2242 | benign | -1.296 | Destabilizing | 0.374 | N | 0.371 | neutral | N | 0.490505554 | None | None | N |
T/V | 0.5803 | likely_pathogenic | 0.5374 | ambiguous | -0.306 | Destabilizing | 0.976 | D | 0.571 | neutral | None | None | None | None | N |
T/W | 0.958 | likely_pathogenic | 0.9492 | pathogenic | -0.804 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | N |
T/Y | 0.8932 | likely_pathogenic | 0.8816 | pathogenic | -0.466 | Destabilizing | 0.998 | D | 0.659 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.