Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17621 | 53086;53087;53088 | chr2:178607926;178607925;178607924 | chr2:179472653;179472652;179472651 |
N2AB | 15980 | 48163;48164;48165 | chr2:178607926;178607925;178607924 | chr2:179472653;179472652;179472651 |
N2A | 15053 | 45382;45383;45384 | chr2:178607926;178607925;178607924 | chr2:179472653;179472652;179472651 |
N2B | 8556 | 25891;25892;25893 | chr2:178607926;178607925;178607924 | chr2:179472653;179472652;179472651 |
Novex-1 | 8681 | 26266;26267;26268 | chr2:178607926;178607925;178607924 | chr2:179472653;179472652;179472651 |
Novex-2 | 8748 | 26467;26468;26469 | chr2:178607926;178607925;178607924 | chr2:179472653;179472652;179472651 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.896 | N | 0.484 | 0.299 | 0.313518423057 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/Q | None | None | 0.984 | N | 0.451 | 0.328 | 0.254244900254 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2127 | likely_benign | 0.1747 | benign | -0.028 | Destabilizing | 0.026 | N | 0.297 | neutral | N | 0.512648908 | None | None | N |
E/C | 0.9155 | likely_pathogenic | 0.8516 | pathogenic | -0.263 | Destabilizing | 0.999 | D | 0.594 | neutral | None | None | None | None | N |
E/D | 0.1179 | likely_benign | 0.1025 | benign | -0.352 | Destabilizing | 0.011 | N | 0.173 | neutral | N | 0.479115124 | None | None | N |
E/F | 0.8973 | likely_pathogenic | 0.8331 | pathogenic | -0.039 | Destabilizing | 0.988 | D | 0.551 | neutral | None | None | None | None | N |
E/G | 0.1543 | likely_benign | 0.1241 | benign | -0.143 | Destabilizing | 0.811 | D | 0.439 | neutral | N | 0.468824344 | None | None | N |
E/H | 0.5806 | likely_pathogenic | 0.4793 | ambiguous | 0.602 | Stabilizing | 0.999 | D | 0.428 | neutral | None | None | None | None | N |
E/I | 0.6371 | likely_pathogenic | 0.5383 | ambiguous | 0.218 | Stabilizing | 0.976 | D | 0.55 | neutral | None | None | None | None | N |
E/K | 0.2049 | likely_benign | 0.1588 | benign | 0.395 | Stabilizing | 0.896 | D | 0.484 | neutral | N | 0.47030364 | None | None | N |
E/L | 0.6089 | likely_pathogenic | 0.5078 | ambiguous | 0.218 | Stabilizing | 0.976 | D | 0.489 | neutral | None | None | None | None | N |
E/M | 0.6948 | likely_pathogenic | 0.5758 | pathogenic | -0.044 | Destabilizing | 0.999 | D | 0.515 | neutral | None | None | None | None | N |
E/N | 0.2961 | likely_benign | 0.2296 | benign | 0.099 | Stabilizing | 0.952 | D | 0.429 | neutral | None | None | None | None | N |
E/P | 0.3806 | ambiguous | 0.3237 | benign | 0.154 | Stabilizing | 0.988 | D | 0.444 | neutral | None | None | None | None | N |
E/Q | 0.1841 | likely_benign | 0.1507 | benign | 0.113 | Stabilizing | 0.984 | D | 0.451 | neutral | N | 0.512939696 | None | None | N |
E/R | 0.3352 | likely_benign | 0.2628 | benign | 0.653 | Stabilizing | 0.988 | D | 0.443 | neutral | None | None | None | None | N |
E/S | 0.2249 | likely_benign | 0.1818 | benign | -0.026 | Destabilizing | 0.851 | D | 0.452 | neutral | None | None | None | None | N |
E/T | 0.3006 | likely_benign | 0.2373 | benign | 0.079 | Stabilizing | 0.919 | D | 0.417 | neutral | None | None | None | None | N |
E/V | 0.3875 | ambiguous | 0.3188 | benign | 0.154 | Stabilizing | 0.938 | D | 0.405 | neutral | N | 0.513318124 | None | None | N |
E/W | 0.9245 | likely_pathogenic | 0.8684 | pathogenic | 0.015 | Stabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | N |
E/Y | 0.7776 | likely_pathogenic | 0.6835 | pathogenic | 0.185 | Stabilizing | 0.996 | D | 0.507 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.