Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17623 | 53092;53093;53094 | chr2:178607920;178607919;178607918 | chr2:179472647;179472646;179472645 |
N2AB | 15982 | 48169;48170;48171 | chr2:178607920;178607919;178607918 | chr2:179472647;179472646;179472645 |
N2A | 15055 | 45388;45389;45390 | chr2:178607920;178607919;178607918 | chr2:179472647;179472646;179472645 |
N2B | 8558 | 25897;25898;25899 | chr2:178607920;178607919;178607918 | chr2:179472647;179472646;179472645 |
Novex-1 | 8683 | 26272;26273;26274 | chr2:178607920;178607919;178607918 | chr2:179472647;179472646;179472645 |
Novex-2 | 8750 | 26473;26474;26475 | chr2:178607920;178607919;178607918 | chr2:179472647;179472646;179472645 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/T | rs2055311301 | None | 0.425 | N | 0.346 | 0.2 | 0.667830379453 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/T | rs2055311301 | None | 0.425 | N | 0.346 | 0.2 | 0.667830379453 | gnomAD-4.0.0 | 2.56481E-06 | None | None | None | None | N | None | 1.69342E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39559E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.1809 | likely_benign | 0.1704 | benign | -1.386 | Destabilizing | 0.3 | N | 0.22 | neutral | None | None | None | None | N |
M/C | 0.5461 | ambiguous | 0.5465 | ambiguous | -1.031 | Destabilizing | 0.981 | D | 0.329 | neutral | None | None | None | None | N |
M/D | 0.7245 | likely_pathogenic | 0.6808 | pathogenic | -0.146 | Destabilizing | 0.828 | D | 0.374 | neutral | None | None | None | None | N |
M/E | 0.3251 | likely_benign | 0.3053 | benign | -0.088 | Destabilizing | 0.495 | N | 0.345 | neutral | None | None | None | None | N |
M/F | 0.4149 | ambiguous | 0.3828 | ambiguous | -0.326 | Destabilizing | 0.704 | D | 0.212 | neutral | None | None | None | None | N |
M/G | 0.4399 | ambiguous | 0.4103 | ambiguous | -1.701 | Destabilizing | 0.495 | N | 0.345 | neutral | None | None | None | None | N |
M/H | 0.4654 | ambiguous | 0.4285 | ambiguous | -0.62 | Destabilizing | 0.981 | D | 0.369 | neutral | None | None | None | None | N |
M/I | 0.2393 | likely_benign | 0.2143 | benign | -0.572 | Destabilizing | 0.139 | N | 0.237 | neutral | N | 0.394997805 | None | None | N |
M/K | 0.1627 | likely_benign | 0.136 | benign | -0.337 | Destabilizing | 0.425 | N | 0.328 | neutral | N | 0.376755973 | None | None | N |
M/L | 0.1151 | likely_benign | 0.1049 | benign | -0.572 | Destabilizing | 0.001 | N | 0.054 | neutral | N | 0.356247415 | None | None | N |
M/N | 0.3144 | likely_benign | 0.2973 | benign | -0.328 | Destabilizing | 0.828 | D | 0.437 | neutral | None | None | None | None | N |
M/P | 0.1279 | likely_benign | 0.1362 | benign | -0.817 | Destabilizing | 0.001 | N | 0.177 | neutral | None | None | None | None | N |
M/Q | 0.1662 | likely_benign | 0.1576 | benign | -0.335 | Destabilizing | 0.828 | D | 0.211 | neutral | None | None | None | None | N |
M/R | 0.1727 | likely_benign | 0.1439 | benign | 0.104 | Stabilizing | 0.784 | D | 0.349 | neutral | N | 0.35597527 | None | None | N |
M/S | 0.2755 | likely_benign | 0.2664 | benign | -0.945 | Destabilizing | 0.495 | N | 0.345 | neutral | None | None | None | None | N |
M/T | 0.1713 | likely_benign | 0.1492 | benign | -0.77 | Destabilizing | 0.425 | N | 0.346 | neutral | N | 0.370947509 | None | None | N |
M/V | 0.0917 | likely_benign | 0.087 | benign | -0.817 | Destabilizing | 0.139 | N | 0.201 | neutral | N | 0.38907191 | None | None | N |
M/W | 0.63 | likely_pathogenic | 0.6087 | pathogenic | -0.297 | Destabilizing | 0.995 | D | 0.301 | neutral | None | None | None | None | N |
M/Y | 0.5194 | ambiguous | 0.4902 | ambiguous | -0.292 | Destabilizing | 0.936 | D | 0.405 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.