Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17626 | 53101;53102;53103 | chr2:178607911;178607910;178607909 | chr2:179472638;179472637;179472636 |
N2AB | 15985 | 48178;48179;48180 | chr2:178607911;178607910;178607909 | chr2:179472638;179472637;179472636 |
N2A | 15058 | 45397;45398;45399 | chr2:178607911;178607910;178607909 | chr2:179472638;179472637;179472636 |
N2B | 8561 | 25906;25907;25908 | chr2:178607911;178607910;178607909 | chr2:179472638;179472637;179472636 |
Novex-1 | 8686 | 26281;26282;26283 | chr2:178607911;178607910;178607909 | chr2:179472638;179472637;179472636 |
Novex-2 | 8753 | 26482;26483;26484 | chr2:178607911;178607910;178607909 | chr2:179472638;179472637;179472636 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.159 | 0.156 | 0.350088858571 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1005 | likely_benign | 0.092 | benign | -1.038 | Destabilizing | None | N | 0.091 | neutral | N | 0.428051585 | None | None | N |
V/C | 0.5013 | ambiguous | 0.459 | ambiguous | -0.899 | Destabilizing | 0.356 | N | 0.311 | neutral | None | None | None | None | N |
V/D | 0.1483 | likely_benign | 0.1245 | benign | -1.124 | Destabilizing | 0.029 | N | 0.374 | neutral | N | 0.369253998 | None | None | N |
V/E | 0.1364 | likely_benign | 0.1245 | benign | -1.103 | Destabilizing | 0.072 | N | 0.312 | neutral | None | None | None | None | N |
V/F | 0.1396 | likely_benign | 0.1161 | benign | -0.779 | Destabilizing | 0.171 | N | 0.357 | neutral | N | 0.459451928 | None | None | N |
V/G | 0.1044 | likely_benign | 0.0967 | benign | -1.293 | Destabilizing | 0.012 | N | 0.333 | neutral | N | 0.409812541 | None | None | N |
V/H | 0.3163 | likely_benign | 0.2744 | benign | -0.532 | Destabilizing | 0.356 | N | 0.372 | neutral | None | None | None | None | N |
V/I | 0.0816 | likely_benign | 0.0766 | benign | -0.433 | Destabilizing | None | N | 0.159 | neutral | N | 0.442578321 | None | None | N |
V/K | 0.1691 | likely_benign | 0.1585 | benign | -0.907 | Destabilizing | 0.072 | N | 0.335 | neutral | None | None | None | None | N |
V/L | 0.1312 | likely_benign | 0.1284 | benign | -0.433 | Destabilizing | 0.012 | N | 0.236 | neutral | N | 0.453352675 | None | None | N |
V/M | 0.1213 | likely_benign | 0.1111 | benign | -0.671 | Destabilizing | 0.356 | N | 0.339 | neutral | None | None | None | None | N |
V/N | 0.1039 | likely_benign | 0.0868 | benign | -0.942 | Destabilizing | 0.001 | N | 0.307 | neutral | None | None | None | None | N |
V/P | 0.277 | likely_benign | 0.3515 | ambiguous | -0.604 | Destabilizing | None | N | 0.218 | neutral | None | None | None | None | N |
V/Q | 0.1604 | likely_benign | 0.1542 | benign | -1.049 | Destabilizing | 0.356 | N | 0.415 | neutral | None | None | None | None | N |
V/R | 0.1777 | likely_benign | 0.1639 | benign | -0.424 | Destabilizing | 0.214 | N | 0.439 | neutral | None | None | None | None | N |
V/S | 0.0987 | likely_benign | 0.0892 | benign | -1.336 | Destabilizing | 0.003 | N | 0.279 | neutral | None | None | None | None | N |
V/T | 0.1086 | likely_benign | 0.0961 | benign | -1.202 | Destabilizing | None | N | 0.099 | neutral | None | None | None | None | N |
V/W | 0.6494 | likely_pathogenic | 0.5895 | pathogenic | -0.929 | Destabilizing | 0.864 | D | 0.405 | neutral | None | None | None | None | N |
V/Y | 0.3205 | likely_benign | 0.2774 | benign | -0.625 | Destabilizing | 0.356 | N | 0.328 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.