Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1762753104;53105;53106 chr2:178607908;178607907;178607906chr2:179472635;179472634;179472633
N2AB1598648181;48182;48183 chr2:178607908;178607907;178607906chr2:179472635;179472634;179472633
N2A1505945400;45401;45402 chr2:178607908;178607907;178607906chr2:179472635;179472634;179472633
N2B856225909;25910;25911 chr2:178607908;178607907;178607906chr2:179472635;179472634;179472633
Novex-1868726284;26285;26286 chr2:178607908;178607907;178607906chr2:179472635;179472634;179472633
Novex-2875426485;26486;26487 chr2:178607908;178607907;178607906chr2:179472635;179472634;179472633
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGT
  • RefSeq wild type template codon: GCA
  • Domain: Fn3-16
  • Domain position: 59
  • Structural Position: 89
  • Q(SASA): 0.3929
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs767433978 -0.816 1.0 N 0.707 0.319 0.504235531984 gnomAD-2.1.1 8.04E-06 None None None None N None 0 0 None 0 5.6E-05 None 0 None 0 8.88E-06 0
R/C rs767433978 -0.816 1.0 N 0.707 0.319 0.504235531984 gnomAD-3.1.2 1.32E-05 None None None None N None 4.83E-05 0 0 0 0 None 0 0 0 0 0
R/C rs767433978 -0.816 1.0 N 0.707 0.319 0.504235531984 gnomAD-4.0.0 4.34014E-06 None None None None N None 4.00898E-05 0 None 0 2.23594E-05 None 0 0 2.5438E-06 0 0
R/G None None 0.988 N 0.587 0.34 0.512883945787 gnomAD-4.0.0 6.84474E-07 None None None None N None 0 0 None 0 0 None 0 0 8.99755E-07 0 0
R/H rs536494011 -1.296 1.0 N 0.628 0.299 0.17948927462 gnomAD-2.1.1 5.36E-05 None None None None N None 4.13E-05 0 None 0 0 None 0 None 4E-05 1.0157E-04 0
R/H rs536494011 -1.296 1.0 N 0.628 0.299 0.17948927462 gnomAD-3.1.2 2.63E-05 None None None None N None 2.41E-05 0 0 0 0 None 0 0 4.42E-05 0 0
R/H rs536494011 -1.296 1.0 N 0.628 0.299 0.17948927462 1000 genomes 1.99681E-04 None None None None N None 8E-04 0 None None 0 0 None None None 0 None
R/H rs536494011 -1.296 1.0 N 0.628 0.299 0.17948927462 gnomAD-4.0.0 3.3478E-05 None None None None N None 2.66773E-05 3.33567E-05 None 0 0 None 1.5627E-05 0 3.56141E-05 2.19616E-05 8.0082E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.5903 likely_pathogenic 0.4528 ambiguous -0.918 Destabilizing 0.86 D 0.563 neutral None None None None N
R/C 0.1458 likely_benign 0.1126 benign -1.078 Destabilizing 1.0 D 0.707 prob.neutral N 0.456075188 None None N
R/D 0.8432 likely_pathogenic 0.7408 pathogenic -0.832 Destabilizing 0.993 D 0.691 prob.neutral None None None None N
R/E 0.5629 ambiguous 0.4399 ambiguous -0.633 Destabilizing 0.926 D 0.567 neutral None None None None N
R/F 0.7538 likely_pathogenic 0.6134 pathogenic -0.323 Destabilizing 0.915 D 0.717 prob.delet. None None None None N
R/G 0.3719 ambiguous 0.2514 benign -1.257 Destabilizing 0.988 D 0.587 neutral N 0.478431178 None None N
R/H 0.1397 likely_benign 0.1112 benign -1.391 Destabilizing 1.0 D 0.628 neutral N 0.501962193 None None N
R/I 0.5958 likely_pathogenic 0.4492 ambiguous 0.03 Stabilizing 0.915 D 0.663 neutral None None None None N
R/K 0.1399 likely_benign 0.1094 benign -0.775 Destabilizing 0.837 D 0.536 neutral None None None None N
R/L 0.3109 likely_benign 0.1966 benign 0.03 Stabilizing 0.036 N 0.46 neutral N 0.431464745 None None N
R/M 0.467 ambiguous 0.3467 ambiguous -0.633 Destabilizing 0.956 D 0.668 neutral None None None None N
R/N 0.6297 likely_pathogenic 0.5261 ambiguous -0.993 Destabilizing 0.993 D 0.615 neutral None None None None N
R/P 0.4836 ambiguous 0.3555 ambiguous -0.27 Destabilizing 0.996 D 0.676 prob.neutral N 0.471081926 None None N
R/Q 0.1293 likely_benign 0.1028 benign -0.845 Destabilizing 0.993 D 0.616 neutral None None None None N
R/S 0.6601 likely_pathogenic 0.5192 ambiguous -1.482 Destabilizing 0.988 D 0.611 neutral N 0.486011306 None None N
R/T 0.3281 likely_benign 0.2281 benign -1.081 Destabilizing 0.86 D 0.602 neutral None None None None N
R/V 0.6295 likely_pathogenic 0.4805 ambiguous -0.27 Destabilizing 0.754 D 0.625 neutral None None None None N
R/W 0.3219 likely_benign 0.2297 benign -0.087 Destabilizing 0.998 D 0.711 prob.delet. None None None None N
R/Y 0.5586 ambiguous 0.4219 ambiguous 0.113 Stabilizing 0.978 D 0.677 prob.neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.