Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17634 | 53125;53126;53127 | chr2:178607887;178607886;178607885 | chr2:179472614;179472613;179472612 |
N2AB | 15993 | 48202;48203;48204 | chr2:178607887;178607886;178607885 | chr2:179472614;179472613;179472612 |
N2A | 15066 | 45421;45422;45423 | chr2:178607887;178607886;178607885 | chr2:179472614;179472613;179472612 |
N2B | 8569 | 25930;25931;25932 | chr2:178607887;178607886;178607885 | chr2:179472614;179472613;179472612 |
Novex-1 | 8694 | 26305;26306;26307 | chr2:178607887;178607886;178607885 | chr2:179472614;179472613;179472612 |
Novex-2 | 8761 | 26506;26507;26508 | chr2:178607887;178607886;178607885 | chr2:179472614;179472613;179472612 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs1219503783 | -1.014 | 0.901 | N | 0.729 | 0.221 | 0.427368086475 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
I/M | rs1219503783 | -1.014 | 0.901 | N | 0.729 | 0.221 | 0.427368086475 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/M | rs1219503783 | -1.014 | 0.901 | N | 0.729 | 0.221 | 0.427368086475 | gnomAD-4.0.0 | 6.58181E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47215E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.808 | likely_pathogenic | 0.6795 | pathogenic | -2.233 | Highly Destabilizing | 0.415 | N | 0.755 | deleterious | None | None | None | None | N |
I/C | 0.873 | likely_pathogenic | 0.7695 | pathogenic | -1.32 | Destabilizing | 0.996 | D | 0.812 | deleterious | None | None | None | None | N |
I/D | 0.9854 | likely_pathogenic | 0.968 | pathogenic | -2.16 | Highly Destabilizing | 0.987 | D | 0.876 | deleterious | None | None | None | None | N |
I/E | 0.9653 | likely_pathogenic | 0.943 | pathogenic | -2.062 | Highly Destabilizing | 0.961 | D | 0.868 | deleterious | None | None | None | None | N |
I/F | 0.6238 | likely_pathogenic | 0.465 | ambiguous | -1.439 | Destabilizing | 0.901 | D | 0.729 | prob.delet. | N | 0.442637036 | None | None | N |
I/G | 0.9378 | likely_pathogenic | 0.8733 | pathogenic | -2.662 | Highly Destabilizing | 0.961 | D | 0.854 | deleterious | None | None | None | None | N |
I/H | 0.9761 | likely_pathogenic | 0.9497 | pathogenic | -1.944 | Destabilizing | 0.996 | D | 0.88 | deleterious | None | None | None | None | N |
I/K | 0.9479 | likely_pathogenic | 0.9158 | pathogenic | -1.769 | Destabilizing | 0.961 | D | 0.872 | deleterious | None | None | None | None | N |
I/L | 0.1707 | likely_benign | 0.1326 | benign | -1.06 | Destabilizing | 0.19 | N | 0.538 | neutral | N | 0.222504833 | None | None | N |
I/M | 0.1956 | likely_benign | 0.1462 | benign | -0.781 | Destabilizing | 0.901 | D | 0.729 | prob.delet. | N | 0.391458854 | None | None | N |
I/N | 0.8367 | likely_pathogenic | 0.7345 | pathogenic | -1.734 | Destabilizing | 0.983 | D | 0.884 | deleterious | N | 0.472959943 | None | None | N |
I/P | 0.9605 | likely_pathogenic | 0.9235 | pathogenic | -1.425 | Destabilizing | 0.987 | D | 0.885 | deleterious | None | None | None | None | N |
I/Q | 0.9506 | likely_pathogenic | 0.9142 | pathogenic | -1.805 | Destabilizing | 0.987 | D | 0.876 | deleterious | None | None | None | None | N |
I/R | 0.9378 | likely_pathogenic | 0.8934 | pathogenic | -1.209 | Destabilizing | 0.961 | D | 0.883 | deleterious | None | None | None | None | N |
I/S | 0.8647 | likely_pathogenic | 0.7561 | pathogenic | -2.352 | Highly Destabilizing | 0.901 | D | 0.828 | deleterious | N | 0.472786584 | None | None | N |
I/T | 0.7738 | likely_pathogenic | 0.6224 | pathogenic | -2.13 | Highly Destabilizing | 0.722 | D | 0.771 | deleterious | N | 0.453931465 | None | None | N |
I/V | 0.1123 | likely_benign | 0.0944 | benign | -1.425 | Destabilizing | 0.001 | N | 0.389 | neutral | N | 0.352497821 | None | None | N |
I/W | 0.9843 | likely_pathogenic | 0.9629 | pathogenic | -1.673 | Destabilizing | 0.996 | D | 0.866 | deleterious | None | None | None | None | N |
I/Y | 0.9319 | likely_pathogenic | 0.877 | pathogenic | -1.436 | Destabilizing | 0.961 | D | 0.816 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.