Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17636 | 53131;53132;53133 | chr2:178607881;178607880;178607879 | chr2:179472608;179472607;179472606 |
N2AB | 15995 | 48208;48209;48210 | chr2:178607881;178607880;178607879 | chr2:179472608;179472607;179472606 |
N2A | 15068 | 45427;45428;45429 | chr2:178607881;178607880;178607879 | chr2:179472608;179472607;179472606 |
N2B | 8571 | 25936;25937;25938 | chr2:178607881;178607880;178607879 | chr2:179472608;179472607;179472606 |
Novex-1 | 8696 | 26311;26312;26313 | chr2:178607881;178607880;178607879 | chr2:179472608;179472607;179472606 |
Novex-2 | 8763 | 26512;26513;26514 | chr2:178607881;178607880;178607879 | chr2:179472608;179472607;179472606 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs748175453 | -0.417 | 0.999 | N | 0.6 | 0.287 | 0.40722173914 | gnomAD-2.1.1 | 8.22E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.18863E-03 | None | 0 | None | 0 | 0 | 0 |
E/D | rs748175453 | -0.417 | 0.999 | N | 0.6 | 0.287 | 0.40722173914 | gnomAD-3.1.2 | 4.61E-05 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 1.16686E-03 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs748175453 | -0.417 | 0.999 | N | 0.6 | 0.287 | 0.40722173914 | gnomAD-4.0.0 | 1.98384E-05 | None | None | None | None | N | None | 0 | 1.66783E-05 | None | 0 | 6.70961E-04 | None | 0 | 0 | 0 | 0 | 1.60169E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2168 | likely_benign | 0.2096 | benign | -0.232 | Destabilizing | 0.999 | D | 0.661 | neutral | D | 0.522596542 | None | None | N |
E/C | 0.9319 | likely_pathogenic | 0.9299 | pathogenic | 0.055 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/D | 0.398 | ambiguous | 0.3722 | ambiguous | -0.32 | Destabilizing | 0.999 | D | 0.6 | neutral | N | 0.484334933 | None | None | N |
E/F | 0.9481 | likely_pathogenic | 0.9398 | pathogenic | -0.197 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
E/G | 0.3413 | ambiguous | 0.327 | benign | -0.4 | Destabilizing | 1.0 | D | 0.621 | neutral | N | 0.497919737 | None | None | N |
E/H | 0.7781 | likely_pathogenic | 0.7739 | pathogenic | 0.12 | Stabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
E/I | 0.6293 | likely_pathogenic | 0.6289 | pathogenic | 0.163 | Stabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
E/K | 0.2581 | likely_benign | 0.2509 | benign | 0.553 | Stabilizing | 0.999 | D | 0.707 | prob.neutral | N | 0.471141748 | None | None | N |
E/L | 0.7009 | likely_pathogenic | 0.6973 | pathogenic | 0.163 | Stabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | N |
E/M | 0.7014 | likely_pathogenic | 0.6909 | pathogenic | 0.184 | Stabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | N |
E/N | 0.5662 | likely_pathogenic | 0.5453 | ambiguous | 0.215 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/P | 0.5104 | ambiguous | 0.5077 | ambiguous | 0.051 | Stabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
E/Q | 0.2017 | likely_benign | 0.2024 | benign | 0.23 | Stabilizing | 1.0 | D | 0.682 | prob.neutral | N | 0.471395238 | None | None | N |
E/R | 0.4466 | ambiguous | 0.4406 | ambiguous | 0.705 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/S | 0.3974 | ambiguous | 0.381 | ambiguous | 0.09 | Stabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/T | 0.3981 | ambiguous | 0.394 | ambiguous | 0.23 | Stabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
E/V | 0.3759 | ambiguous | 0.3726 | ambiguous | 0.051 | Stabilizing | 1.0 | D | 0.625 | neutral | N | 0.477093231 | None | None | N |
E/W | 0.9788 | likely_pathogenic | 0.9774 | pathogenic | -0.081 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/Y | 0.8993 | likely_pathogenic | 0.8868 | pathogenic | 0.05 | Stabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.