Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17642 | 53149;53150;53151 | chr2:178607863;178607862;178607861 | chr2:179472590;179472589;179472588 |
N2AB | 16001 | 48226;48227;48228 | chr2:178607863;178607862;178607861 | chr2:179472590;179472589;179472588 |
N2A | 15074 | 45445;45446;45447 | chr2:178607863;178607862;178607861 | chr2:179472590;179472589;179472588 |
N2B | 8577 | 25954;25955;25956 | chr2:178607863;178607862;178607861 | chr2:179472590;179472589;179472588 |
Novex-1 | 8702 | 26329;26330;26331 | chr2:178607863;178607862;178607861 | chr2:179472590;179472589;179472588 |
Novex-2 | 8769 | 26530;26531;26532 | chr2:178607863;178607862;178607861 | chr2:179472590;179472589;179472588 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.968 | N | 0.767 | 0.253 | 0.478905595755 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9299 | likely_pathogenic | 0.9373 | pathogenic | -2.618 | Highly Destabilizing | 0.825 | D | 0.756 | deleterious | None | None | None | None | N |
L/C | 0.8505 | likely_pathogenic | 0.881 | pathogenic | -1.789 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
L/D | 0.9989 | likely_pathogenic | 0.9991 | pathogenic | -3.063 | Highly Destabilizing | 0.996 | D | 0.857 | deleterious | None | None | None | None | N |
L/E | 0.9948 | likely_pathogenic | 0.9948 | pathogenic | -2.743 | Highly Destabilizing | 0.996 | D | 0.854 | deleterious | None | None | None | None | N |
L/F | 0.2814 | likely_benign | 0.2592 | benign | -1.5 | Destabilizing | 0.968 | D | 0.767 | deleterious | N | 0.354628475 | None | None | N |
L/G | 0.9848 | likely_pathogenic | 0.9851 | pathogenic | -3.25 | Highly Destabilizing | 0.996 | D | 0.849 | deleterious | None | None | None | None | N |
L/H | 0.983 | likely_pathogenic | 0.9849 | pathogenic | -2.838 | Highly Destabilizing | 0.999 | D | 0.838 | deleterious | N | 0.501186694 | None | None | N |
L/I | 0.1245 | likely_benign | 0.1324 | benign | -0.735 | Destabilizing | 0.011 | N | 0.285 | neutral | N | 0.415314362 | None | None | N |
L/K | 0.9929 | likely_pathogenic | 0.9935 | pathogenic | -2.003 | Highly Destabilizing | 0.988 | D | 0.827 | deleterious | None | None | None | None | N |
L/M | 0.2592 | likely_benign | 0.2624 | benign | -0.775 | Destabilizing | 0.976 | D | 0.754 | deleterious | None | None | None | None | N |
L/N | 0.9938 | likely_pathogenic | 0.9948 | pathogenic | -2.639 | Highly Destabilizing | 0.996 | D | 0.852 | deleterious | None | None | None | None | N |
L/P | 0.9838 | likely_pathogenic | 0.987 | pathogenic | -1.35 | Destabilizing | 0.995 | D | 0.852 | deleterious | N | 0.519945813 | None | None | N |
L/Q | 0.9825 | likely_pathogenic | 0.984 | pathogenic | -2.303 | Highly Destabilizing | 0.996 | D | 0.837 | deleterious | None | None | None | None | N |
L/R | 0.9837 | likely_pathogenic | 0.984 | pathogenic | -2.024 | Highly Destabilizing | 0.995 | D | 0.828 | deleterious | N | 0.519772455 | None | None | N |
L/S | 0.9908 | likely_pathogenic | 0.9918 | pathogenic | -3.309 | Highly Destabilizing | 0.988 | D | 0.809 | deleterious | None | None | None | None | N |
L/T | 0.958 | likely_pathogenic | 0.9643 | pathogenic | -2.815 | Highly Destabilizing | 0.919 | D | 0.771 | deleterious | None | None | None | None | N |
L/V | 0.1655 | likely_benign | 0.1743 | benign | -1.35 | Destabilizing | 0.046 | N | 0.309 | neutral | N | 0.40238235 | None | None | N |
L/W | 0.8835 | likely_pathogenic | 0.8859 | pathogenic | -1.91 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
L/Y | 0.8857 | likely_pathogenic | 0.8816 | pathogenic | -1.632 | Destabilizing | 0.996 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.