Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17644 | 53155;53156;53157 | chr2:178607857;178607856;178607855 | chr2:179472584;179472583;179472582 |
N2AB | 16003 | 48232;48233;48234 | chr2:178607857;178607856;178607855 | chr2:179472584;179472583;179472582 |
N2A | 15076 | 45451;45452;45453 | chr2:178607857;178607856;178607855 | chr2:179472584;179472583;179472582 |
N2B | 8579 | 25960;25961;25962 | chr2:178607857;178607856;178607855 | chr2:179472584;179472583;179472582 |
Novex-1 | 8704 | 26335;26336;26337 | chr2:178607857;178607856;178607855 | chr2:179472584;179472583;179472582 |
Novex-2 | 8771 | 26536;26537;26538 | chr2:178607857;178607856;178607855 | chr2:179472584;179472583;179472582 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | rs1490004465 | -3.279 | 1.0 | D | 0.873 | 0.857 | 0.895584942453 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
V/G | rs1490004465 | -3.279 | 1.0 | D | 0.873 | 0.857 | 0.895584942453 | gnomAD-4.0.0 | 3.18555E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.56545E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8786 | likely_pathogenic | 0.8897 | pathogenic | -2.493 | Highly Destabilizing | 0.999 | D | 0.649 | neutral | D | 0.541123136 | None | None | N |
V/C | 0.9733 | likely_pathogenic | 0.9736 | pathogenic | -2.084 | Highly Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
V/D | 0.9976 | likely_pathogenic | 0.9986 | pathogenic | -3.443 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
V/E | 0.9939 | likely_pathogenic | 0.9956 | pathogenic | -3.155 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.624376043 | None | None | N |
V/F | 0.9399 | likely_pathogenic | 0.9334 | pathogenic | -1.275 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
V/G | 0.9322 | likely_pathogenic | 0.9476 | pathogenic | -3.043 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.624376043 | None | None | N |
V/H | 0.999 | likely_pathogenic | 0.9991 | pathogenic | -2.843 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
V/I | 0.1291 | likely_benign | 0.1135 | benign | -0.89 | Destabilizing | 0.998 | D | 0.594 | neutral | None | None | None | None | N |
V/K | 0.9964 | likely_pathogenic | 0.9971 | pathogenic | -2.029 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/L | 0.8566 | likely_pathogenic | 0.8429 | pathogenic | -0.89 | Destabilizing | 0.997 | D | 0.661 | neutral | N | 0.517646375 | None | None | N |
V/M | 0.9141 | likely_pathogenic | 0.8998 | pathogenic | -1.281 | Destabilizing | 1.0 | D | 0.743 | deleterious | D | 0.546149565 | None | None | N |
V/N | 0.9938 | likely_pathogenic | 0.9953 | pathogenic | -2.616 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
V/P | 0.9946 | likely_pathogenic | 0.9952 | pathogenic | -1.408 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
V/Q | 0.9946 | likely_pathogenic | 0.9954 | pathogenic | -2.3 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/R | 0.9909 | likely_pathogenic | 0.9928 | pathogenic | -2.015 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
V/S | 0.9714 | likely_pathogenic | 0.9779 | pathogenic | -3.099 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
V/T | 0.943 | likely_pathogenic | 0.953 | pathogenic | -2.675 | Highly Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
V/W | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -1.858 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/Y | 0.9956 | likely_pathogenic | 0.995 | pathogenic | -1.607 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.