Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17648 | 53167;53168;53169 | chr2:178607845;178607844;178607843 | chr2:179472572;179472571;179472570 |
N2AB | 16007 | 48244;48245;48246 | chr2:178607845;178607844;178607843 | chr2:179472572;179472571;179472570 |
N2A | 15080 | 45463;45464;45465 | chr2:178607845;178607844;178607843 | chr2:179472572;179472571;179472570 |
N2B | 8583 | 25972;25973;25974 | chr2:178607845;178607844;178607843 | chr2:179472572;179472571;179472570 |
Novex-1 | 8708 | 26347;26348;26349 | chr2:178607845;178607844;178607843 | chr2:179472572;179472571;179472570 |
Novex-2 | 8775 | 26548;26549;26550 | chr2:178607845;178607844;178607843 | chr2:179472572;179472571;179472570 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs752142832 | -0.782 | 0.999 | N | 0.589 | 0.512 | 0.224531998449 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
N/S | rs752142832 | -0.782 | 0.999 | N | 0.589 | 0.512 | 0.224531998449 | gnomAD-4.0.0 | 6.16042E-06 | None | None | None | None | N | None | 0 | 2.23704E-05 | None | 0 | 0 | None | 0 | 0 | 7.19802E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9898 | likely_pathogenic | 0.9874 | pathogenic | -0.27 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
N/C | 0.9032 | likely_pathogenic | 0.9118 | pathogenic | -0.357 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
N/D | 0.9782 | likely_pathogenic | 0.9693 | pathogenic | -2.252 | Highly Destabilizing | 0.999 | D | 0.609 | neutral | N | 0.521767529 | None | None | N |
N/E | 0.9973 | likely_pathogenic | 0.9971 | pathogenic | -2.121 | Highly Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | N |
N/F | 0.9979 | likely_pathogenic | 0.9978 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
N/G | 0.9777 | likely_pathogenic | 0.9747 | pathogenic | -0.554 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
N/H | 0.9561 | likely_pathogenic | 0.9534 | pathogenic | -0.446 | Destabilizing | 1.0 | D | 0.779 | deleterious | D | 0.533630814 | None | None | N |
N/I | 0.9833 | likely_pathogenic | 0.9813 | pathogenic | 0.428 | Stabilizing | 1.0 | D | 0.778 | deleterious | D | 0.533884303 | None | None | N |
N/K | 0.997 | likely_pathogenic | 0.9966 | pathogenic | -0.04 | Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.532870345 | None | None | N |
N/L | 0.9473 | likely_pathogenic | 0.951 | pathogenic | 0.428 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
N/M | 0.9812 | likely_pathogenic | 0.9806 | pathogenic | 0.662 | Stabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
N/P | 0.9947 | likely_pathogenic | 0.9939 | pathogenic | 0.224 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
N/Q | 0.9963 | likely_pathogenic | 0.9962 | pathogenic | -1.078 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
N/R | 0.9946 | likely_pathogenic | 0.9944 | pathogenic | 0.026 | Stabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
N/S | 0.6553 | likely_pathogenic | 0.6445 | pathogenic | -0.787 | Destabilizing | 0.999 | D | 0.589 | neutral | N | 0.490025563 | None | None | N |
N/T | 0.8207 | likely_pathogenic | 0.8409 | pathogenic | -0.514 | Destabilizing | 0.999 | D | 0.712 | prob.delet. | N | 0.487187953 | None | None | N |
N/V | 0.9779 | likely_pathogenic | 0.976 | pathogenic | 0.224 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
N/W | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -0.468 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
N/Y | 0.9878 | likely_pathogenic | 0.9859 | pathogenic | 0.031 | Stabilizing | 1.0 | D | 0.79 | deleterious | D | 0.533123835 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.