Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17656 | 53191;53192;53193 | chr2:178607821;178607820;178607819 | chr2:179472548;179472547;179472546 |
N2AB | 16015 | 48268;48269;48270 | chr2:178607821;178607820;178607819 | chr2:179472548;179472547;179472546 |
N2A | 15088 | 45487;45488;45489 | chr2:178607821;178607820;178607819 | chr2:179472548;179472547;179472546 |
N2B | 8591 | 25996;25997;25998 | chr2:178607821;178607820;178607819 | chr2:179472548;179472547;179472546 |
Novex-1 | 8716 | 26371;26372;26373 | chr2:178607821;178607820;178607819 | chr2:179472548;179472547;179472546 |
Novex-2 | 8783 | 26572;26573;26574 | chr2:178607821;178607820;178607819 | chr2:179472548;179472547;179472546 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs1269389543 | None | 1.0 | N | 0.813 | 0.435 | 0.582701273649 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
G/R | rs1269389543 | None | 1.0 | N | 0.813 | 0.435 | 0.582701273649 | gnomAD-4.0.0 | 6.20024E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47943E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1688 | likely_benign | 0.1683 | benign | -0.865 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.439969585 | None | None | N |
G/C | 0.5048 | ambiguous | 0.5211 | ambiguous | -0.979 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
G/D | 0.8651 | likely_pathogenic | 0.8785 | pathogenic | -2.06 | Highly Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
G/E | 0.8066 | likely_pathogenic | 0.82 | pathogenic | -2.028 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | N | 0.465807425 | None | None | N |
G/F | 0.9239 | likely_pathogenic | 0.9298 | pathogenic | -0.914 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
G/H | 0.9249 | likely_pathogenic | 0.9296 | pathogenic | -1.73 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
G/I | 0.8081 | likely_pathogenic | 0.8365 | pathogenic | -0.253 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
G/K | 0.916 | likely_pathogenic | 0.9196 | pathogenic | -1.443 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
G/L | 0.8513 | likely_pathogenic | 0.861 | pathogenic | -0.253 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
G/M | 0.8595 | likely_pathogenic | 0.8701 | pathogenic | -0.319 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
G/N | 0.8874 | likely_pathogenic | 0.9 | pathogenic | -1.296 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
G/P | 0.9936 | likely_pathogenic | 0.9947 | pathogenic | -0.417 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
G/Q | 0.8414 | likely_pathogenic | 0.8484 | pathogenic | -1.371 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
G/R | 0.8004 | likely_pathogenic | 0.8057 | pathogenic | -1.251 | Destabilizing | 1.0 | D | 0.813 | deleterious | N | 0.454033046 | None | None | N |
G/S | 0.2593 | likely_benign | 0.2662 | benign | -1.493 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
G/T | 0.5567 | ambiguous | 0.5976 | pathogenic | -1.397 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
G/V | 0.6086 | likely_pathogenic | 0.6507 | pathogenic | -0.417 | Destabilizing | 1.0 | D | 0.829 | deleterious | N | 0.453019088 | None | None | N |
G/W | 0.9026 | likely_pathogenic | 0.9118 | pathogenic | -1.498 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
G/Y | 0.9045 | likely_pathogenic | 0.912 | pathogenic | -1.032 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.