Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17662 | 53209;53210;53211 | chr2:178607803;178607802;178607801 | chr2:179472530;179472529;179472528 |
N2AB | 16021 | 48286;48287;48288 | chr2:178607803;178607802;178607801 | chr2:179472530;179472529;179472528 |
N2A | 15094 | 45505;45506;45507 | chr2:178607803;178607802;178607801 | chr2:179472530;179472529;179472528 |
N2B | 8597 | 26014;26015;26016 | chr2:178607803;178607802;178607801 | chr2:179472530;179472529;179472528 |
Novex-1 | 8722 | 26389;26390;26391 | chr2:178607803;178607802;178607801 | chr2:179472530;179472529;179472528 |
Novex-2 | 8789 | 26590;26591;26592 | chr2:178607803;178607802;178607801 | chr2:179472530;179472529;179472528 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.688 | N | 0.36 | 0.157 | 0.238705975628 | gnomAD-4.0.0 | 1.59297E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78443E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1022 | likely_benign | 0.0934 | benign | -0.463 | Destabilizing | 0.688 | D | 0.36 | neutral | N | 0.436374706 | None | None | N |
T/C | 0.4572 | ambiguous | 0.4408 | ambiguous | -0.263 | Destabilizing | 0.998 | D | 0.361 | neutral | None | None | None | None | N |
T/D | 0.6499 | likely_pathogenic | 0.5907 | pathogenic | 0.034 | Stabilizing | 0.994 | D | 0.421 | neutral | None | None | None | None | N |
T/E | 0.3865 | ambiguous | 0.3428 | ambiguous | -0.029 | Destabilizing | 0.994 | D | 0.405 | neutral | None | None | None | None | N |
T/F | 0.3408 | ambiguous | 0.2969 | benign | -0.855 | Destabilizing | 0.009 | N | 0.355 | neutral | None | None | None | None | N |
T/G | 0.4654 | ambiguous | 0.4168 | ambiguous | -0.628 | Destabilizing | 0.978 | D | 0.48 | neutral | None | None | None | None | N |
T/H | 0.2973 | likely_benign | 0.2818 | benign | -0.941 | Destabilizing | 0.998 | D | 0.458 | neutral | None | None | None | None | N |
T/I | 0.1728 | likely_benign | 0.1619 | benign | -0.14 | Destabilizing | 0.067 | N | 0.295 | neutral | N | 0.398240393 | None | None | N |
T/K | 0.1564 | likely_benign | 0.1516 | benign | -0.424 | Destabilizing | 0.994 | D | 0.419 | neutral | None | None | None | None | N |
T/L | 0.13 | likely_benign | 0.1202 | benign | -0.14 | Destabilizing | 0.594 | D | 0.471 | neutral | None | None | None | None | N |
T/M | 0.103 | likely_benign | 0.0956 | benign | 0.129 | Stabilizing | 0.981 | D | 0.379 | neutral | None | None | None | None | N |
T/N | 0.2074 | likely_benign | 0.1905 | benign | -0.225 | Destabilizing | 0.991 | D | 0.401 | neutral | N | 0.4556539 | None | None | N |
T/P | 0.1916 | likely_benign | 0.1616 | benign | -0.218 | Destabilizing | 0.991 | D | 0.44 | neutral | N | 0.455827259 | None | None | N |
T/Q | 0.2312 | likely_benign | 0.2053 | benign | -0.481 | Destabilizing | 0.994 | D | 0.363 | neutral | None | None | None | None | N |
T/R | 0.1414 | likely_benign | 0.1345 | benign | -0.123 | Destabilizing | 0.994 | D | 0.439 | neutral | None | None | None | None | N |
T/S | 0.1865 | likely_benign | 0.1649 | benign | -0.457 | Destabilizing | 0.971 | D | 0.401 | neutral | N | 0.454787109 | None | None | N |
T/V | 0.1453 | likely_benign | 0.1359 | benign | -0.218 | Destabilizing | 0.594 | D | 0.413 | neutral | None | None | None | None | N |
T/W | 0.6973 | likely_pathogenic | 0.6495 | pathogenic | -0.819 | Destabilizing | 0.998 | D | 0.483 | neutral | None | None | None | None | N |
T/Y | 0.4142 | ambiguous | 0.3754 | ambiguous | -0.552 | Destabilizing | 0.925 | D | 0.503 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.