Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17665 | 53218;53219;53220 | chr2:178607794;178607793;178607792 | chr2:179472521;179472520;179472519 |
N2AB | 16024 | 48295;48296;48297 | chr2:178607794;178607793;178607792 | chr2:179472521;179472520;179472519 |
N2A | 15097 | 45514;45515;45516 | chr2:178607794;178607793;178607792 | chr2:179472521;179472520;179472519 |
N2B | 8600 | 26023;26024;26025 | chr2:178607794;178607793;178607792 | chr2:179472521;179472520;179472519 |
Novex-1 | 8725 | 26398;26399;26400 | chr2:178607794;178607793;178607792 | chr2:179472521;179472520;179472519 |
Novex-2 | 8792 | 26599;26600;26601 | chr2:178607794;178607793;178607792 | chr2:179472521;179472520;179472519 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs768659420 | -0.203 | 0.702 | N | 0.601 | 0.097 | 0.316198179892 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/D | rs768659420 | -0.203 | 0.702 | N | 0.601 | 0.097 | 0.316198179892 | gnomAD-4.0.0 | 1.59312E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86151E-06 | 0 | 0 |
E/K | None | None | 0.919 | N | 0.677 | 0.243 | 0.328752806141 | gnomAD-4.0.0 | 1.59314E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86156E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.249 | likely_benign | 0.2651 | benign | 0.063 | Stabilizing | 0.958 | D | 0.693 | prob.delet. | N | 0.503117852 | None | None | N |
E/C | 0.915 | likely_pathogenic | 0.9235 | pathogenic | -0.103 | Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
E/D | 0.1635 | likely_benign | 0.1482 | benign | -0.336 | Destabilizing | 0.702 | D | 0.601 | neutral | N | 0.424350424 | None | None | N |
E/F | 0.8739 | likely_pathogenic | 0.8788 | pathogenic | -0.03 | Destabilizing | 0.997 | D | 0.734 | deleterious | None | None | None | None | N |
E/G | 0.349 | ambiguous | 0.3625 | ambiguous | -0.031 | Destabilizing | 0.919 | D | 0.667 | prob.neutral | N | 0.492908032 | None | None | N |
E/H | 0.7329 | likely_pathogenic | 0.7595 | pathogenic | 0.531 | Stabilizing | 0.991 | D | 0.561 | neutral | None | None | None | None | N |
E/I | 0.5443 | ambiguous | 0.5273 | ambiguous | 0.247 | Stabilizing | 0.997 | D | 0.768 | deleterious | None | None | None | None | N |
E/K | 0.3275 | likely_benign | 0.3418 | ambiguous | 0.495 | Stabilizing | 0.919 | D | 0.677 | prob.neutral | N | 0.490626626 | None | None | N |
E/L | 0.5409 | ambiguous | 0.5527 | ambiguous | 0.247 | Stabilizing | 0.991 | D | 0.631 | neutral | None | None | None | None | N |
E/M | 0.6181 | likely_pathogenic | 0.6306 | pathogenic | 0.047 | Stabilizing | 0.999 | D | 0.725 | deleterious | None | None | None | None | N |
E/N | 0.3693 | ambiguous | 0.3566 | ambiguous | 0.277 | Stabilizing | 0.078 | N | 0.285 | neutral | None | None | None | None | N |
E/P | 0.5418 | ambiguous | 0.5693 | pathogenic | 0.203 | Stabilizing | 0.997 | D | 0.645 | neutral | None | None | None | None | N |
E/Q | 0.2655 | likely_benign | 0.2801 | benign | 0.281 | Stabilizing | 0.958 | D | 0.58 | neutral | N | 0.48455024 | None | None | N |
E/R | 0.5467 | ambiguous | 0.5738 | pathogenic | 0.642 | Stabilizing | 0.968 | D | 0.625 | neutral | None | None | None | None | N |
E/S | 0.3334 | likely_benign | 0.3364 | benign | 0.159 | Stabilizing | 0.938 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/T | 0.4084 | ambiguous | 0.4006 | ambiguous | 0.248 | Stabilizing | 0.938 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/V | 0.3439 | ambiguous | 0.339 | benign | 0.203 | Stabilizing | 0.996 | D | 0.598 | neutral | N | 0.504682411 | None | None | N |
E/W | 0.9653 | likely_pathogenic | 0.9681 | pathogenic | -0.016 | Destabilizing | 0.999 | D | 0.852 | deleterious | None | None | None | None | N |
E/Y | 0.8157 | likely_pathogenic | 0.8263 | pathogenic | 0.186 | Stabilizing | 0.997 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.