Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17677 | 53254;53255;53256 | chr2:178607659;178607658;178607657 | chr2:179472386;179472385;179472384 |
N2AB | 16036 | 48331;48332;48333 | chr2:178607659;178607658;178607657 | chr2:179472386;179472385;179472384 |
N2A | 15109 | 45550;45551;45552 | chr2:178607659;178607658;178607657 | chr2:179472386;179472385;179472384 |
N2B | 8612 | 26059;26060;26061 | chr2:178607659;178607658;178607657 | chr2:179472386;179472385;179472384 |
Novex-1 | 8737 | 26434;26435;26436 | chr2:178607659;178607658;178607657 | chr2:179472386;179472385;179472384 |
Novex-2 | 8804 | 26635;26636;26637 | chr2:178607659;178607658;178607657 | chr2:179472386;179472385;179472384 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 1.0 | D | 0.532 | 0.393 | 0.633926072375 | gnomAD-4.0.0 | 1.59294E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43308E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.107 | likely_benign | 0.1024 | benign | -0.184 | Destabilizing | 0.973 | D | 0.522 | neutral | N | 0.508830316 | None | None | I |
S/C | 0.2482 | likely_benign | 0.2535 | benign | -0.698 | Destabilizing | 1.0 | D | 0.532 | neutral | D | 0.529843094 | None | None | I |
S/D | 0.6325 | likely_pathogenic | 0.5989 | pathogenic | -0.21 | Destabilizing | 0.996 | D | 0.532 | neutral | None | None | None | None | I |
S/E | 0.6791 | likely_pathogenic | 0.663 | pathogenic | -0.304 | Destabilizing | 0.996 | D | 0.533 | neutral | None | None | None | None | I |
S/F | 0.4185 | ambiguous | 0.3784 | ambiguous | -0.984 | Destabilizing | 0.999 | D | 0.545 | neutral | D | 0.529496377 | None | None | I |
S/G | 0.1746 | likely_benign | 0.1616 | benign | -0.195 | Destabilizing | 0.996 | D | 0.553 | neutral | None | None | None | None | I |
S/H | 0.6121 | likely_pathogenic | 0.5989 | pathogenic | -0.306 | Destabilizing | 1.0 | D | 0.526 | neutral | None | None | None | None | I |
S/I | 0.4525 | ambiguous | 0.4426 | ambiguous | -0.274 | Destabilizing | 1.0 | D | 0.548 | neutral | None | None | None | None | I |
S/K | 0.8733 | likely_pathogenic | 0.8544 | pathogenic | -0.485 | Destabilizing | 0.996 | D | 0.531 | neutral | None | None | None | None | I |
S/L | 0.1709 | likely_benign | 0.1609 | benign | -0.274 | Destabilizing | 0.999 | D | 0.495 | neutral | None | None | None | None | I |
S/M | 0.2928 | likely_benign | 0.2841 | benign | -0.513 | Destabilizing | 1.0 | D | 0.525 | neutral | None | None | None | None | I |
S/N | 0.3178 | likely_benign | 0.2918 | benign | -0.369 | Destabilizing | 0.999 | D | 0.537 | neutral | None | None | None | None | I |
S/P | 0.7779 | likely_pathogenic | 0.72 | pathogenic | -0.224 | Destabilizing | 0.217 | N | 0.371 | neutral | D | 0.528802944 | None | None | I |
S/Q | 0.7054 | likely_pathogenic | 0.6954 | pathogenic | -0.529 | Destabilizing | 1.0 | D | 0.531 | neutral | None | None | None | None | I |
S/R | 0.8246 | likely_pathogenic | 0.7983 | pathogenic | -0.175 | Destabilizing | 1.0 | D | 0.535 | neutral | None | None | None | None | I |
S/T | 0.0899 | likely_benign | 0.0894 | benign | -0.46 | Destabilizing | 0.994 | D | 0.549 | neutral | D | 0.528282869 | None | None | I |
S/V | 0.3868 | ambiguous | 0.3779 | ambiguous | -0.224 | Destabilizing | 0.999 | D | 0.525 | neutral | None | None | None | None | I |
S/W | 0.5423 | ambiguous | 0.5201 | ambiguous | -1.122 | Destabilizing | 1.0 | D | 0.648 | neutral | None | None | None | None | I |
S/Y | 0.3862 | ambiguous | 0.3743 | ambiguous | -0.792 | Destabilizing | 0.999 | D | 0.537 | neutral | D | 0.529669735 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.