Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1768 | 5527;5528;5529 | chr2:178776562;178776561;178776560 | chr2:179641289;179641288;179641287 |
N2AB | 1768 | 5527;5528;5529 | chr2:178776562;178776561;178776560 | chr2:179641289;179641288;179641287 |
N2A | 1768 | 5527;5528;5529 | chr2:178776562;178776561;178776560 | chr2:179641289;179641288;179641287 |
N2B | 1722 | 5389;5390;5391 | chr2:178776562;178776561;178776560 | chr2:179641289;179641288;179641287 |
Novex-1 | 1722 | 5389;5390;5391 | chr2:178776562;178776561;178776560 | chr2:179641289;179641288;179641287 |
Novex-2 | 1722 | 5389;5390;5391 | chr2:178776562;178776561;178776560 | chr2:179641289;179641288;179641287 |
Novex-3 | 1768 | 5527;5528;5529 | chr2:178776562;178776561;178776560 | chr2:179641289;179641288;179641287 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs2092250294 | None | 1.0 | D | 0.736 | 0.578 | 0.725071404083 | gnomAD-4.0.0 | 1.59333E-06 | None | None | None | None | I | None | 0 | 2.28666E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8895 | likely_pathogenic | 0.8675 | pathogenic | -2.063 | Highly Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
Y/C | 0.6381 | likely_pathogenic | 0.554 | ambiguous | -0.876 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | D | 0.547333665 | None | None | I |
Y/D | 0.912 | likely_pathogenic | 0.8672 | pathogenic | -0.358 | Destabilizing | 1.0 | D | 0.766 | deleterious | N | 0.505229309 | None | None | I |
Y/E | 0.9793 | likely_pathogenic | 0.9676 | pathogenic | -0.237 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | I |
Y/F | 0.1244 | likely_benign | 0.1225 | benign | -0.661 | Destabilizing | 0.999 | D | 0.481 | neutral | N | 0.485117775 | None | None | I |
Y/G | 0.8632 | likely_pathogenic | 0.8391 | pathogenic | -2.397 | Highly Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
Y/H | 0.7147 | likely_pathogenic | 0.6352 | pathogenic | -0.685 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | D | 0.563051106 | None | None | I |
Y/I | 0.9131 | likely_pathogenic | 0.8891 | pathogenic | -1.047 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
Y/K | 0.9818 | likely_pathogenic | 0.9722 | pathogenic | -1.001 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
Y/L | 0.7385 | likely_pathogenic | 0.7143 | pathogenic | -1.047 | Destabilizing | 0.999 | D | 0.654 | neutral | None | None | None | None | I |
Y/M | 0.9125 | likely_pathogenic | 0.8969 | pathogenic | -0.812 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
Y/N | 0.7189 | likely_pathogenic | 0.645 | pathogenic | -1.408 | Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.459145956 | None | None | I |
Y/P | 0.9592 | likely_pathogenic | 0.9501 | pathogenic | -1.382 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
Y/Q | 0.9617 | likely_pathogenic | 0.9425 | pathogenic | -1.245 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
Y/R | 0.9401 | likely_pathogenic | 0.908 | pathogenic | -0.677 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | I |
Y/S | 0.6224 | likely_pathogenic | 0.5601 | ambiguous | -2.027 | Highly Destabilizing | 1.0 | D | 0.759 | deleterious | N | 0.495736981 | None | None | I |
Y/T | 0.8759 | likely_pathogenic | 0.8468 | pathogenic | -1.808 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
Y/V | 0.8079 | likely_pathogenic | 0.7714 | pathogenic | -1.382 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
Y/W | 0.6145 | likely_pathogenic | 0.5591 | ambiguous | -0.176 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.