Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17682 | 53269;53270;53271 | chr2:178607644;178607643;178607642 | chr2:179472371;179472370;179472369 |
N2AB | 16041 | 48346;48347;48348 | chr2:178607644;178607643;178607642 | chr2:179472371;179472370;179472369 |
N2A | 15114 | 45565;45566;45567 | chr2:178607644;178607643;178607642 | chr2:179472371;179472370;179472369 |
N2B | 8617 | 26074;26075;26076 | chr2:178607644;178607643;178607642 | chr2:179472371;179472370;179472369 |
Novex-1 | 8742 | 26449;26450;26451 | chr2:178607644;178607643;178607642 | chr2:179472371;179472370;179472369 |
Novex-2 | 8809 | 26650;26651;26652 | chr2:178607644;178607643;178607642 | chr2:179472371;179472370;179472369 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.051 | N | 0.26 | 0.311 | 0.655104906463 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8769 | likely_pathogenic | 0.8684 | pathogenic | -2.035 | Highly Destabilizing | 0.525 | D | 0.388 | neutral | None | None | None | None | I |
I/C | 0.8581 | likely_pathogenic | 0.8431 | pathogenic | -1.48 | Destabilizing | 0.998 | D | 0.473 | neutral | None | None | None | None | I |
I/D | 0.9784 | likely_pathogenic | 0.9829 | pathogenic | -1.54 | Destabilizing | 0.974 | D | 0.548 | neutral | None | None | None | None | I |
I/E | 0.922 | likely_pathogenic | 0.9379 | pathogenic | -1.437 | Destabilizing | 0.974 | D | 0.551 | neutral | None | None | None | None | I |
I/F | 0.2715 | likely_benign | 0.2824 | benign | -1.235 | Destabilizing | 0.949 | D | 0.485 | neutral | None | None | None | None | I |
I/G | 0.9628 | likely_pathogenic | 0.9659 | pathogenic | -2.468 | Highly Destabilizing | 0.915 | D | 0.543 | neutral | None | None | None | None | I |
I/H | 0.8539 | likely_pathogenic | 0.8736 | pathogenic | -1.724 | Destabilizing | 0.998 | D | 0.559 | neutral | None | None | None | None | I |
I/K | 0.7758 | likely_pathogenic | 0.8172 | pathogenic | -1.542 | Destabilizing | 0.966 | D | 0.553 | neutral | N | 0.517783447 | None | None | I |
I/L | 0.1645 | likely_benign | 0.1575 | benign | -0.862 | Destabilizing | 0.267 | N | 0.328 | neutral | N | 0.421888909 | None | None | I |
I/M | 0.192 | likely_benign | 0.1813 | benign | -0.834 | Destabilizing | 0.966 | D | 0.503 | neutral | N | 0.491039563 | None | None | I |
I/N | 0.8049 | likely_pathogenic | 0.832 | pathogenic | -1.54 | Destabilizing | 0.974 | D | 0.571 | neutral | None | None | None | None | I |
I/P | 0.978 | likely_pathogenic | 0.9826 | pathogenic | -1.225 | Destabilizing | 0.991 | D | 0.565 | neutral | None | None | None | None | I |
I/Q | 0.8026 | likely_pathogenic | 0.831 | pathogenic | -1.569 | Destabilizing | 0.991 | D | 0.59 | neutral | None | None | None | None | I |
I/R | 0.7579 | likely_pathogenic | 0.8022 | pathogenic | -1.096 | Destabilizing | 0.966 | D | 0.581 | neutral | N | 0.486190217 | None | None | I |
I/S | 0.8555 | likely_pathogenic | 0.8593 | pathogenic | -2.25 | Highly Destabilizing | 0.728 | D | 0.482 | neutral | None | None | None | None | I |
I/T | 0.7886 | likely_pathogenic | 0.7837 | pathogenic | -2.01 | Highly Destabilizing | 0.051 | N | 0.26 | neutral | N | 0.485748387 | None | None | I |
I/V | 0.1468 | likely_benign | 0.1296 | benign | -1.225 | Destabilizing | 0.002 | N | 0.131 | neutral | N | 0.429273455 | None | None | I |
I/W | 0.8844 | likely_pathogenic | 0.8989 | pathogenic | -1.397 | Destabilizing | 0.998 | D | 0.601 | neutral | None | None | None | None | I |
I/Y | 0.716 | likely_pathogenic | 0.7409 | pathogenic | -1.151 | Destabilizing | 0.974 | D | 0.508 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.