Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17686 | 53281;53282;53283 | chr2:178607632;178607631;178607630 | chr2:179472359;179472358;179472357 |
N2AB | 16045 | 48358;48359;48360 | chr2:178607632;178607631;178607630 | chr2:179472359;179472358;179472357 |
N2A | 15118 | 45577;45578;45579 | chr2:178607632;178607631;178607630 | chr2:179472359;179472358;179472357 |
N2B | 8621 | 26086;26087;26088 | chr2:178607632;178607631;178607630 | chr2:179472359;179472358;179472357 |
Novex-1 | 8746 | 26461;26462;26463 | chr2:178607632;178607631;178607630 | chr2:179472359;179472358;179472357 |
Novex-2 | 8813 | 26662;26663;26664 | chr2:178607632;178607631;178607630 | chr2:179472359;179472358;179472357 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs1576364760 | None | 0.998 | N | 0.551 | 0.252 | 0.16115917748 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94553E-04 | None | 0 | 0 | 0 | 0 | 0 |
A/S | rs1576364760 | None | 0.998 | N | 0.551 | 0.252 | 0.16115917748 | gnomAD-4.0.0 | 3.84634E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.43202E-05 | None | 0 | 0 | 0 | 2.68082E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8323 | likely_pathogenic | 0.8669 | pathogenic | -0.759 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
A/D | 0.9646 | likely_pathogenic | 0.9691 | pathogenic | -1.137 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | N | 0.471291608 | None | None | N |
A/E | 0.909 | likely_pathogenic | 0.9238 | pathogenic | -1.232 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
A/F | 0.9532 | likely_pathogenic | 0.9624 | pathogenic | -1.103 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
A/G | 0.6221 | likely_pathogenic | 0.6674 | pathogenic | -0.984 | Destabilizing | 0.999 | D | 0.566 | neutral | N | 0.492941035 | None | None | N |
A/H | 0.9516 | likely_pathogenic | 0.9542 | pathogenic | -1.124 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
A/I | 0.818 | likely_pathogenic | 0.8597 | pathogenic | -0.49 | Destabilizing | 0.994 | D | 0.649 | neutral | None | None | None | None | N |
A/K | 0.9454 | likely_pathogenic | 0.9534 | pathogenic | -1.227 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
A/L | 0.8132 | likely_pathogenic | 0.8485 | pathogenic | -0.49 | Destabilizing | 0.994 | D | 0.513 | neutral | None | None | None | None | N |
A/M | 0.8269 | likely_pathogenic | 0.8598 | pathogenic | -0.316 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
A/N | 0.8689 | likely_pathogenic | 0.8737 | pathogenic | -0.807 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
A/P | 0.9379 | likely_pathogenic | 0.9593 | pathogenic | -0.556 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | N | 0.461225523 | None | None | N |
A/Q | 0.8672 | likely_pathogenic | 0.8712 | pathogenic | -1.06 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
A/R | 0.8809 | likely_pathogenic | 0.8986 | pathogenic | -0.732 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
A/S | 0.2724 | likely_benign | 0.3112 | benign | -1.058 | Destabilizing | 0.998 | D | 0.551 | neutral | N | 0.510485676 | None | None | N |
A/T | 0.5532 | ambiguous | 0.6377 | pathogenic | -1.076 | Destabilizing | 0.996 | D | 0.665 | neutral | N | 0.461225523 | None | None | N |
A/V | 0.4313 | ambiguous | 0.5094 | ambiguous | -0.556 | Destabilizing | 0.884 | D | 0.375 | neutral | N | 0.499881893 | None | None | N |
A/W | 0.9916 | likely_pathogenic | 0.9933 | pathogenic | -1.356 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
A/Y | 0.9648 | likely_pathogenic | 0.9681 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.