Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17688 | 53287;53288;53289 | chr2:178607626;178607625;178607624 | chr2:179472353;179472352;179472351 |
N2AB | 16047 | 48364;48365;48366 | chr2:178607626;178607625;178607624 | chr2:179472353;179472352;179472351 |
N2A | 15120 | 45583;45584;45585 | chr2:178607626;178607625;178607624 | chr2:179472353;179472352;179472351 |
N2B | 8623 | 26092;26093;26094 | chr2:178607626;178607625;178607624 | chr2:179472353;179472352;179472351 |
Novex-1 | 8748 | 26467;26468;26469 | chr2:178607626;178607625;178607624 | chr2:179472353;179472352;179472351 |
Novex-2 | 8815 | 26668;26669;26670 | chr2:178607626;178607625;178607624 | chr2:179472353;179472352;179472351 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs201675016 | 0.056 | None | N | 0.101 | 0.073 | None | gnomAD-4.0.0 | 9.23365E-04 | None | None | None | None | N | None | 0 | 4.57561E-05 | None | 0 | 2.77994E-05 | None | 9.57504E-03 | 0 | 8.29785E-05 | 0 | 1.36629E-03 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3611 | ambiguous | 0.3114 | benign | -0.152 | Destabilizing | 0.055 | N | 0.367 | neutral | None | None | None | None | N |
K/C | 0.685 | likely_pathogenic | 0.5984 | pathogenic | -0.072 | Destabilizing | 0.958 | D | 0.361 | neutral | None | None | None | None | N |
K/D | 0.4446 | ambiguous | 0.4007 | ambiguous | 0.014 | Stabilizing | 0.055 | N | 0.364 | neutral | None | None | None | None | N |
K/E | 0.1442 | likely_benign | 0.1266 | benign | 0.044 | Stabilizing | None | N | 0.101 | neutral | N | 0.343034897 | None | None | N |
K/F | 0.8733 | likely_pathogenic | 0.8154 | pathogenic | -0.222 | Destabilizing | 0.859 | D | 0.369 | neutral | None | None | None | None | N |
K/G | 0.4312 | ambiguous | 0.3666 | ambiguous | -0.416 | Destabilizing | 0.22 | N | 0.373 | neutral | None | None | None | None | N |
K/H | 0.3126 | likely_benign | 0.2718 | benign | -0.848 | Destabilizing | 0.497 | N | 0.331 | neutral | None | None | None | None | N |
K/I | 0.5902 | likely_pathogenic | 0.5112 | ambiguous | 0.481 | Stabilizing | 0.667 | D | 0.402 | neutral | None | None | None | None | N |
K/L | 0.4997 | ambiguous | 0.4222 | ambiguous | 0.481 | Stabilizing | 0.22 | N | 0.376 | neutral | None | None | None | None | N |
K/M | 0.2927 | likely_benign | 0.244 | benign | 0.419 | Stabilizing | 0.602 | D | 0.337 | neutral | N | 0.501962193 | None | None | N |
K/N | 0.294 | likely_benign | 0.2539 | benign | 0.176 | Stabilizing | 0.175 | N | 0.301 | neutral | N | 0.42003703 | None | None | N |
K/P | 0.9805 | likely_pathogenic | 0.9718 | pathogenic | 0.3 | Stabilizing | 0.364 | N | 0.401 | neutral | None | None | None | None | N |
K/Q | 0.0951 | likely_benign | 0.0859 | benign | -0.004 | Destabilizing | None | N | 0.101 | neutral | N | 0.406337014 | None | None | N |
K/R | 0.1045 | likely_benign | 0.0957 | benign | -0.192 | Destabilizing | 0.042 | N | 0.354 | neutral | N | 0.44048966 | None | None | N |
K/S | 0.3177 | likely_benign | 0.2733 | benign | -0.351 | Destabilizing | 0.055 | N | 0.349 | neutral | None | None | None | None | N |
K/T | 0.1807 | likely_benign | 0.1544 | benign | -0.154 | Destabilizing | 0.175 | N | 0.361 | neutral | N | 0.428829872 | None | None | N |
K/V | 0.4612 | ambiguous | 0.3935 | ambiguous | 0.3 | Stabilizing | 0.22 | N | 0.383 | neutral | None | None | None | None | N |
K/W | 0.8982 | likely_pathogenic | 0.8505 | pathogenic | -0.182 | Destabilizing | 0.958 | D | 0.37 | neutral | None | None | None | None | N |
K/Y | 0.7088 | likely_pathogenic | 0.6359 | pathogenic | 0.148 | Stabilizing | 0.667 | D | 0.367 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.