Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17689 | 53290;53291;53292 | chr2:178607623;178607622;178607621 | chr2:179472350;179472349;179472348 |
N2AB | 16048 | 48367;48368;48369 | chr2:178607623;178607622;178607621 | chr2:179472350;179472349;179472348 |
N2A | 15121 | 45586;45587;45588 | chr2:178607623;178607622;178607621 | chr2:179472350;179472349;179472348 |
N2B | 8624 | 26095;26096;26097 | chr2:178607623;178607622;178607621 | chr2:179472350;179472349;179472348 |
Novex-1 | 8749 | 26470;26471;26472 | chr2:178607623;178607622;178607621 | chr2:179472350;179472349;179472348 |
Novex-2 | 8816 | 26671;26672;26673 | chr2:178607623;178607622;178607621 | chr2:179472350;179472349;179472348 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.91 | N | 0.478 | 0.142 | 0.154104182512 | gnomAD-4.0.0 | 6.00164E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56254E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1462 | likely_benign | 0.1415 | benign | -0.668 | Destabilizing | 0.91 | D | 0.478 | neutral | N | 0.455238042 | None | None | N |
T/C | 0.6044 | likely_pathogenic | 0.5791 | pathogenic | -0.478 | Destabilizing | 1.0 | D | 0.517 | neutral | None | None | None | None | N |
T/D | 0.455 | ambiguous | 0.4584 | ambiguous | 0.12 | Stabilizing | 0.999 | D | 0.495 | neutral | None | None | None | None | N |
T/E | 0.371 | ambiguous | 0.4036 | ambiguous | 0.149 | Stabilizing | 0.999 | D | 0.473 | neutral | None | None | None | None | N |
T/F | 0.4965 | ambiguous | 0.4732 | ambiguous | -0.692 | Destabilizing | 0.991 | D | 0.587 | neutral | None | None | None | None | N |
T/G | 0.5269 | ambiguous | 0.5073 | ambiguous | -0.946 | Destabilizing | 0.996 | D | 0.513 | neutral | None | None | None | None | N |
T/H | 0.4747 | ambiguous | 0.468 | ambiguous | -1.135 | Destabilizing | 1.0 | D | 0.568 | neutral | None | None | None | None | N |
T/I | 0.2173 | likely_benign | 0.2057 | benign | -0.018 | Destabilizing | 0.248 | N | 0.257 | neutral | N | 0.471229156 | None | None | N |
T/K | 0.4173 | ambiguous | 0.4315 | ambiguous | -0.555 | Destabilizing | 0.996 | D | 0.465 | neutral | None | None | None | None | N |
T/L | 0.1727 | likely_benign | 0.164 | benign | -0.018 | Destabilizing | 0.871 | D | 0.444 | neutral | None | None | None | None | N |
T/M | 0.1088 | likely_benign | 0.1048 | benign | 0.021 | Stabilizing | 0.871 | D | 0.427 | neutral | None | None | None | None | N |
T/N | 0.1735 | likely_benign | 0.1553 | benign | -0.602 | Destabilizing | 0.998 | D | 0.481 | neutral | N | 0.488243534 | None | None | N |
T/P | 0.1719 | likely_benign | 0.1514 | benign | -0.201 | Destabilizing | 0.998 | D | 0.499 | neutral | N | 0.472620721 | None | None | N |
T/Q | 0.3549 | ambiguous | 0.3631 | ambiguous | -0.645 | Destabilizing | 0.996 | D | 0.503 | neutral | None | None | None | None | N |
T/R | 0.4027 | ambiguous | 0.4125 | ambiguous | -0.417 | Destabilizing | 0.996 | D | 0.507 | neutral | None | None | None | None | N |
T/S | 0.1797 | likely_benign | 0.1673 | benign | -0.904 | Destabilizing | 0.98 | D | 0.454 | neutral | N | 0.453013453 | None | None | N |
T/V | 0.1674 | likely_benign | 0.162 | benign | -0.201 | Destabilizing | 0.304 | N | 0.219 | neutral | None | None | None | None | N |
T/W | 0.7984 | likely_pathogenic | 0.7984 | pathogenic | -0.681 | Destabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
T/Y | 0.4677 | ambiguous | 0.4657 | ambiguous | -0.411 | Destabilizing | 0.999 | D | 0.579 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.