Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1769 | 5530;5531;5532 | chr2:178776559;178776558;178776557 | chr2:179641286;179641285;179641284 |
N2AB | 1769 | 5530;5531;5532 | chr2:178776559;178776558;178776557 | chr2:179641286;179641285;179641284 |
N2A | 1769 | 5530;5531;5532 | chr2:178776559;178776558;178776557 | chr2:179641286;179641285;179641284 |
N2B | 1723 | 5392;5393;5394 | chr2:178776559;178776558;178776557 | chr2:179641286;179641285;179641284 |
Novex-1 | 1723 | 5392;5393;5394 | chr2:178776559;178776558;178776557 | chr2:179641286;179641285;179641284 |
Novex-2 | 1723 | 5392;5393;5394 | chr2:178776559;178776558;178776557 | chr2:179641286;179641285;179641284 |
Novex-3 | 1769 | 5530;5531;5532 | chr2:178776559;178776558;178776557 | chr2:179641286;179641285;179641284 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.002 | N | 0.137 | 0.316 | 0.0920862733494 | gnomAD-4.0.0 | 1.59371E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85659E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0714 | likely_benign | 0.0659 | benign | -0.581 | Destabilizing | 0.007 | N | 0.077 | neutral | N | 0.445446608 | None | None | I |
S/C | 0.2319 | likely_benign | 0.2199 | benign | -0.442 | Destabilizing | 0.99 | D | 0.287 | neutral | N | 0.521682791 | None | None | I |
S/D | 0.7206 | likely_pathogenic | 0.7053 | pathogenic | 0.139 | Stabilizing | 0.447 | N | 0.209 | neutral | None | None | None | None | I |
S/E | 0.6961 | likely_pathogenic | 0.6652 | pathogenic | 0.07 | Stabilizing | 0.617 | D | 0.192 | neutral | None | None | None | None | I |
S/F | 0.4597 | ambiguous | 0.4401 | ambiguous | -1.028 | Destabilizing | 0.963 | D | 0.359 | neutral | N | 0.510488151 | None | None | I |
S/G | 0.153 | likely_benign | 0.1413 | benign | -0.737 | Destabilizing | 0.25 | N | 0.255 | neutral | None | None | None | None | I |
S/H | 0.5256 | ambiguous | 0.5005 | ambiguous | -1.192 | Destabilizing | 0.85 | D | 0.285 | neutral | None | None | None | None | I |
S/I | 0.3484 | ambiguous | 0.3487 | ambiguous | -0.292 | Destabilizing | 0.92 | D | 0.379 | neutral | None | None | None | None | I |
S/K | 0.873 | likely_pathogenic | 0.8515 | pathogenic | -0.601 | Destabilizing | 0.447 | N | 0.207 | neutral | None | None | None | None | I |
S/L | 0.1762 | likely_benign | 0.1738 | benign | -0.292 | Destabilizing | 0.617 | D | 0.339 | neutral | None | None | None | None | I |
S/M | 0.3416 | ambiguous | 0.3422 | ambiguous | -0.041 | Destabilizing | 0.972 | D | 0.291 | neutral | None | None | None | None | I |
S/N | 0.2783 | likely_benign | 0.2683 | benign | -0.384 | Destabilizing | 0.005 | N | 0.225 | neutral | None | None | None | None | I |
S/P | 0.0857 | likely_benign | 0.0814 | benign | -0.358 | Destabilizing | 0.002 | N | 0.137 | neutral | N | 0.326908303 | None | None | I |
S/Q | 0.5421 | ambiguous | 0.5106 | ambiguous | -0.616 | Destabilizing | 0.85 | D | 0.293 | neutral | None | None | None | None | I |
S/R | 0.8243 | likely_pathogenic | 0.7906 | pathogenic | -0.39 | Destabilizing | 0.85 | D | 0.313 | neutral | None | None | None | None | I |
S/T | 0.1241 | likely_benign | 0.1204 | benign | -0.502 | Destabilizing | 0.334 | N | 0.271 | neutral | N | 0.50296553 | None | None | I |
S/V | 0.2745 | likely_benign | 0.2668 | benign | -0.358 | Destabilizing | 0.617 | D | 0.323 | neutral | None | None | None | None | I |
S/W | 0.6586 | likely_pathogenic | 0.6447 | pathogenic | -0.983 | Destabilizing | 0.992 | D | 0.479 | neutral | None | None | None | None | I |
S/Y | 0.4314 | ambiguous | 0.4164 | ambiguous | -0.729 | Destabilizing | 0.963 | D | 0.357 | neutral | D | 0.571250551 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.