Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17690 | 53293;53294;53295 | chr2:178607620;178607619;178607618 | chr2:179472347;179472346;179472345 |
N2AB | 16049 | 48370;48371;48372 | chr2:178607620;178607619;178607618 | chr2:179472347;179472346;179472345 |
N2A | 15122 | 45589;45590;45591 | chr2:178607620;178607619;178607618 | chr2:179472347;179472346;179472345 |
N2B | 8625 | 26098;26099;26100 | chr2:178607620;178607619;178607618 | chr2:179472347;179472346;179472345 |
Novex-1 | 8750 | 26473;26474;26475 | chr2:178607620;178607619;178607618 | chr2:179472347;179472346;179472345 |
Novex-2 | 8817 | 26674;26675;26676 | chr2:178607620;178607619;178607618 | chr2:179472347;179472346;179472345 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs370469461 | -1.445 | 0.999 | N | 0.871 | 0.597 | 0.805114648059 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | N | None | 6.49E-05 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/P | rs370469461 | -1.445 | 0.999 | N | 0.871 | 0.597 | 0.805114648059 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 1.20691E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/P | rs370469461 | -1.445 | 0.999 | N | 0.871 | 0.597 | 0.805114648059 | gnomAD-4.0.0 | 7.69387E-06 | None | None | None | None | N | None | 8.46339E-05 | 1.69601E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9064 | likely_pathogenic | 0.9256 | pathogenic | -2.718 | Highly Destabilizing | 0.983 | D | 0.679 | prob.neutral | None | None | None | None | N |
L/C | 0.892 | likely_pathogenic | 0.8998 | pathogenic | -2.079 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
L/D | 0.9991 | likely_pathogenic | 0.9995 | pathogenic | -3.168 | Highly Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | N |
L/E | 0.9942 | likely_pathogenic | 0.9968 | pathogenic | -2.906 | Highly Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
L/F | 0.5398 | ambiguous | 0.6137 | pathogenic | -1.671 | Destabilizing | 0.993 | D | 0.779 | deleterious | N | 0.488534323 | None | None | N |
L/G | 0.9911 | likely_pathogenic | 0.9939 | pathogenic | -3.296 | Highly Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
L/H | 0.9839 | likely_pathogenic | 0.9907 | pathogenic | -2.71 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | N | 0.477523033 | None | None | N |
L/I | 0.0972 | likely_benign | 0.1195 | benign | -1.028 | Destabilizing | 0.117 | N | 0.278 | neutral | N | 0.410033467 | None | None | N |
L/K | 0.9869 | likely_pathogenic | 0.9928 | pathogenic | -2.352 | Highly Destabilizing | 0.998 | D | 0.837 | deleterious | None | None | None | None | N |
L/M | 0.3084 | likely_benign | 0.3338 | benign | -0.952 | Destabilizing | 0.995 | D | 0.759 | deleterious | None | None | None | None | N |
L/N | 0.9937 | likely_pathogenic | 0.9965 | pathogenic | -2.816 | Highly Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
L/P | 0.9883 | likely_pathogenic | 0.993 | pathogenic | -1.575 | Destabilizing | 0.999 | D | 0.871 | deleterious | N | 0.495627288 | None | None | N |
L/Q | 0.9782 | likely_pathogenic | 0.9865 | pathogenic | -2.618 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
L/R | 0.9768 | likely_pathogenic | 0.9866 | pathogenic | -2.091 | Highly Destabilizing | 0.999 | D | 0.859 | deleterious | N | 0.495373799 | None | None | N |
L/S | 0.9887 | likely_pathogenic | 0.9929 | pathogenic | -3.504 | Highly Destabilizing | 0.998 | D | 0.831 | deleterious | None | None | None | None | N |
L/T | 0.9515 | likely_pathogenic | 0.9656 | pathogenic | -3.078 | Highly Destabilizing | 0.995 | D | 0.809 | deleterious | None | None | None | None | N |
L/V | 0.1569 | likely_benign | 0.1834 | benign | -1.575 | Destabilizing | 0.898 | D | 0.536 | neutral | N | 0.414204349 | None | None | N |
L/W | 0.9368 | likely_pathogenic | 0.9587 | pathogenic | -2.055 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
L/Y | 0.9551 | likely_pathogenic | 0.9684 | pathogenic | -1.773 | Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.