Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17693 | 53302;53303;53304 | chr2:178607611;178607610;178607609 | chr2:179472338;179472337;179472336 |
N2AB | 16052 | 48379;48380;48381 | chr2:178607611;178607610;178607609 | chr2:179472338;179472337;179472336 |
N2A | 15125 | 45598;45599;45600 | chr2:178607611;178607610;178607609 | chr2:179472338;179472337;179472336 |
N2B | 8628 | 26107;26108;26109 | chr2:178607611;178607610;178607609 | chr2:179472338;179472337;179472336 |
Novex-1 | 8753 | 26482;26483;26484 | chr2:178607611;178607610;178607609 | chr2:179472338;179472337;179472336 |
Novex-2 | 8820 | 26683;26684;26685 | chr2:178607611;178607610;178607609 | chr2:179472338;179472337;179472336 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1176166730 | -0.027 | 0.999 | N | 0.789 | 0.408 | 0.680317807054 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.96E-06 | 0 |
P/L | rs1176166730 | -0.027 | 0.999 | N | 0.789 | 0.408 | 0.680317807054 | gnomAD-4.0.0 | 1.59267E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86069E-06 | 0 | 0 |
P/T | None | None | 0.998 | N | 0.756 | 0.416 | 0.531825494424 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2515 | likely_benign | 0.2497 | benign | -0.999 | Destabilizing | 0.992 | D | 0.58 | neutral | D | 0.529381734 | None | None | I |
P/C | 0.8097 | likely_pathogenic | 0.8093 | pathogenic | -0.814 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
P/D | 0.8133 | likely_pathogenic | 0.8233 | pathogenic | -0.613 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | I |
P/E | 0.68 | likely_pathogenic | 0.7093 | pathogenic | -0.653 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | I |
P/F | 0.8457 | likely_pathogenic | 0.8414 | pathogenic | -0.818 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
P/G | 0.6736 | likely_pathogenic | 0.6684 | pathogenic | -1.257 | Destabilizing | 0.997 | D | 0.683 | prob.neutral | None | None | None | None | I |
P/H | 0.5665 | likely_pathogenic | 0.5791 | pathogenic | -0.743 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
P/I | 0.6739 | likely_pathogenic | 0.6935 | pathogenic | -0.423 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | I |
P/K | 0.749 | likely_pathogenic | 0.7632 | pathogenic | -0.884 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | I |
P/L | 0.3368 | likely_benign | 0.3415 | ambiguous | -0.423 | Destabilizing | 0.999 | D | 0.789 | deleterious | N | 0.515799148 | None | None | I |
P/M | 0.6832 | likely_pathogenic | 0.6899 | pathogenic | -0.436 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
P/N | 0.7148 | likely_pathogenic | 0.7301 | pathogenic | -0.649 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | I |
P/Q | 0.5453 | ambiguous | 0.5561 | ambiguous | -0.823 | Destabilizing | 0.999 | D | 0.793 | deleterious | N | 0.487015036 | None | None | I |
P/R | 0.5682 | likely_pathogenic | 0.5701 | pathogenic | -0.375 | Destabilizing | 0.999 | D | 0.771 | deleterious | N | 0.499117542 | None | None | I |
P/S | 0.3681 | ambiguous | 0.3699 | ambiguous | -1.133 | Destabilizing | 0.957 | D | 0.447 | neutral | N | 0.472931018 | None | None | I |
P/T | 0.3073 | likely_benign | 0.3198 | benign | -1.059 | Destabilizing | 0.998 | D | 0.756 | deleterious | N | 0.449515441 | None | None | I |
P/V | 0.5139 | ambiguous | 0.5293 | ambiguous | -0.578 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
P/W | 0.9123 | likely_pathogenic | 0.917 | pathogenic | -0.951 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
P/Y | 0.8259 | likely_pathogenic | 0.8298 | pathogenic | -0.658 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.