Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17695 | 53308;53309;53310 | chr2:178607605;178607604;178607603 | chr2:179472332;179472331;179472330 |
N2AB | 16054 | 48385;48386;48387 | chr2:178607605;178607604;178607603 | chr2:179472332;179472331;179472330 |
N2A | 15127 | 45604;45605;45606 | chr2:178607605;178607604;178607603 | chr2:179472332;179472331;179472330 |
N2B | 8630 | 26113;26114;26115 | chr2:178607605;178607604;178607603 | chr2:179472332;179472331;179472330 |
Novex-1 | 8755 | 26488;26489;26490 | chr2:178607605;178607604;178607603 | chr2:179472332;179472331;179472330 |
Novex-2 | 8822 | 26689;26690;26691 | chr2:178607605;178607604;178607603 | chr2:179472332;179472331;179472330 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | rs2055207996 | None | 0.024 | N | 0.499 | 0.088 | 0.489938136499 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/G | rs2055207996 | None | 0.024 | N | 0.499 | 0.088 | 0.489938136499 | gnomAD-4.0.0 | 6.5786E-06 | None | None | None | None | I | None | 2.41278E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1527 | likely_benign | 0.1427 | benign | -0.478 | Destabilizing | 0.005 | N | 0.189 | neutral | N | 0.468063916 | None | None | I |
V/C | 0.6386 | likely_pathogenic | 0.6269 | pathogenic | -0.581 | Destabilizing | 0.628 | D | 0.488 | neutral | None | None | None | None | I |
V/D | 0.3 | likely_benign | 0.3082 | benign | -0.288 | Destabilizing | 0.016 | N | 0.514 | neutral | None | None | None | None | I |
V/E | 0.2297 | likely_benign | 0.2382 | benign | -0.411 | Destabilizing | None | N | 0.235 | neutral | N | 0.472045584 | None | None | I |
V/F | 0.1367 | likely_benign | 0.1268 | benign | -0.752 | Destabilizing | 0.072 | N | 0.554 | neutral | None | None | None | None | I |
V/G | 0.2653 | likely_benign | 0.2449 | benign | -0.602 | Destabilizing | 0.024 | N | 0.499 | neutral | N | 0.505910228 | None | None | I |
V/H | 0.3791 | ambiguous | 0.3836 | ambiguous | -0.204 | Destabilizing | None | N | 0.351 | neutral | None | None | None | None | I |
V/I | 0.0723 | likely_benign | 0.0688 | benign | -0.305 | Destabilizing | None | N | 0.136 | neutral | None | None | None | None | I |
V/K | 0.2411 | likely_benign | 0.2339 | benign | -0.397 | Destabilizing | None | N | 0.23 | neutral | None | None | None | None | I |
V/L | 0.1611 | likely_benign | 0.1507 | benign | -0.305 | Destabilizing | 0.002 | N | 0.205 | neutral | N | 0.507526381 | None | None | I |
V/M | 0.1123 | likely_benign | 0.1058 | benign | -0.275 | Destabilizing | 0.171 | N | 0.36 | neutral | N | 0.519724888 | None | None | I |
V/N | 0.1975 | likely_benign | 0.1989 | benign | -0.135 | Destabilizing | 0.072 | N | 0.538 | neutral | None | None | None | None | I |
V/P | 0.8944 | likely_pathogenic | 0.881 | pathogenic | -0.328 | Destabilizing | 0.136 | N | 0.592 | neutral | None | None | None | None | I |
V/Q | 0.2488 | likely_benign | 0.2508 | benign | -0.401 | Destabilizing | 0.038 | N | 0.567 | neutral | None | None | None | None | I |
V/R | 0.2192 | likely_benign | 0.218 | benign | 0.131 | Stabilizing | None | N | 0.331 | neutral | None | None | None | None | I |
V/S | 0.1694 | likely_benign | 0.1628 | benign | -0.491 | Destabilizing | 0.016 | N | 0.417 | neutral | None | None | None | None | I |
V/T | 0.1059 | likely_benign | 0.1049 | benign | -0.515 | Destabilizing | None | N | 0.136 | neutral | None | None | None | None | I |
V/W | 0.7002 | likely_pathogenic | 0.6769 | pathogenic | -0.825 | Destabilizing | 0.864 | D | 0.566 | neutral | None | None | None | None | I |
V/Y | 0.395 | ambiguous | 0.3914 | ambiguous | -0.517 | Destabilizing | 0.072 | N | 0.551 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.