Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17705 | 53338;53339;53340 | chr2:178607575;178607574;178607573 | chr2:179472302;179472301;179472300 |
N2AB | 16064 | 48415;48416;48417 | chr2:178607575;178607574;178607573 | chr2:179472302;179472301;179472300 |
N2A | 15137 | 45634;45635;45636 | chr2:178607575;178607574;178607573 | chr2:179472302;179472301;179472300 |
N2B | 8640 | 26143;26144;26145 | chr2:178607575;178607574;178607573 | chr2:179472302;179472301;179472300 |
Novex-1 | 8765 | 26518;26519;26520 | chr2:178607575;178607574;178607573 | chr2:179472302;179472301;179472300 |
Novex-2 | 8832 | 26719;26720;26721 | chr2:178607575;178607574;178607573 | chr2:179472302;179472301;179472300 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.101 | N | 0.41 | 0.067 | 0.318252033908 | gnomAD-4.0.0 | 4.77693E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72138E-06 | 1.43303E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1617 | likely_benign | 0.1399 | benign | -0.812 | Destabilizing | 0.001 | N | 0.161 | neutral | N | 0.505755513 | None | None | N |
V/C | 0.6604 | likely_pathogenic | 0.6531 | pathogenic | -0.767 | Destabilizing | 0.94 | D | 0.511 | neutral | None | None | None | None | N |
V/D | 0.2252 | likely_benign | 0.2125 | benign | -0.351 | Destabilizing | 0.129 | N | 0.481 | neutral | None | None | None | None | N |
V/E | 0.1495 | likely_benign | 0.1402 | benign | -0.404 | Destabilizing | 0.001 | N | 0.289 | neutral | N | 0.476181967 | None | None | N |
V/F | 0.1606 | likely_benign | 0.1597 | benign | -0.717 | Destabilizing | 0.557 | D | 0.575 | neutral | None | None | None | None | N |
V/G | 0.2121 | likely_benign | 0.197 | benign | -1.033 | Destabilizing | 0.101 | N | 0.464 | neutral | N | 0.48570601 | None | None | N |
V/H | 0.3864 | ambiguous | 0.3818 | ambiguous | -0.434 | Destabilizing | 0.836 | D | 0.569 | neutral | None | None | None | None | N |
V/I | 0.0793 | likely_benign | 0.079 | benign | -0.348 | Destabilizing | 0.101 | N | 0.41 | neutral | N | 0.483977518 | None | None | N |
V/K | 0.2097 | likely_benign | 0.2 | benign | -0.638 | Destabilizing | 0.004 | N | 0.289 | neutral | None | None | None | None | N |
V/L | 0.1809 | likely_benign | 0.1706 | benign | -0.348 | Destabilizing | 0.001 | N | 0.214 | neutral | N | 0.493770437 | None | None | N |
V/M | 0.1341 | likely_benign | 0.1263 | benign | -0.437 | Destabilizing | 0.716 | D | 0.463 | neutral | None | None | None | None | N |
V/N | 0.1699 | likely_benign | 0.1632 | benign | -0.471 | Destabilizing | 0.418 | N | 0.535 | neutral | None | None | None | None | N |
V/P | 0.9163 | likely_pathogenic | 0.8963 | pathogenic | -0.466 | Destabilizing | 0.593 | D | 0.555 | neutral | None | None | None | None | N |
V/Q | 0.1983 | likely_benign | 0.1869 | benign | -0.646 | Destabilizing | 0.264 | N | 0.555 | neutral | None | None | None | None | N |
V/R | 0.225 | likely_benign | 0.2206 | benign | -0.128 | Destabilizing | 0.264 | N | 0.562 | neutral | None | None | None | None | N |
V/S | 0.1543 | likely_benign | 0.1404 | benign | -0.941 | Destabilizing | 0.012 | N | 0.295 | neutral | None | None | None | None | N |
V/T | 0.1272 | likely_benign | 0.1146 | benign | -0.878 | Destabilizing | 0.001 | N | 0.156 | neutral | None | None | None | None | N |
V/W | 0.7551 | likely_pathogenic | 0.7526 | pathogenic | -0.819 | Destabilizing | 0.983 | D | 0.587 | neutral | None | None | None | None | N |
V/Y | 0.423 | ambiguous | 0.4255 | ambiguous | -0.521 | Destabilizing | 0.836 | D | 0.551 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.