Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17708 | 53347;53348;53349 | chr2:178607566;178607565;178607564 | chr2:179472293;179472292;179472291 |
N2AB | 16067 | 48424;48425;48426 | chr2:178607566;178607565;178607564 | chr2:179472293;179472292;179472291 |
N2A | 15140 | 45643;45644;45645 | chr2:178607566;178607565;178607564 | chr2:179472293;179472292;179472291 |
N2B | 8643 | 26152;26153;26154 | chr2:178607566;178607565;178607564 | chr2:179472293;179472292;179472291 |
Novex-1 | 8768 | 26527;26528;26529 | chr2:178607566;178607565;178607564 | chr2:179472293;179472292;179472291 |
Novex-2 | 8835 | 26728;26729;26730 | chr2:178607566;178607565;178607564 | chr2:179472293;179472292;179472291 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs185913848 | 0.502 | 0.106 | D | 0.378 | 0.213 | None | gnomAD-2.1.1 | 3.72269E-04 | None | None | None | None | N | None | 1.65508E-04 | 4.80824E-04 | None | 0 | 0 | None | 1.96091E-04 | None | 4E-05 | 5.73431E-04 | 4.21585E-04 |
K/E | rs185913848 | 0.502 | 0.106 | D | 0.378 | 0.213 | None | gnomAD-3.1.2 | 4.27682E-04 | None | None | None | None | N | None | 1.20685E-04 | 2.62329E-04 | 0 | 0 | 0 | None | 0 | 0 | 8.09633E-04 | 0 | 4.78469E-04 |
K/E | rs185913848 | 0.502 | 0.106 | D | 0.378 | 0.213 | None | 1000 genomes | 7.98722E-04 | None | None | None | None | N | None | 0 | 1.4E-03 | None | None | 0 | 3E-03 | None | None | None | 0 | None |
K/E | rs185913848 | 0.502 | 0.106 | D | 0.378 | 0.213 | None | gnomAD-4.0.0 | 7.12853E-04 | None | None | None | None | N | None | 1.06695E-04 | 5.16822E-04 | None | 0 | 0 | None | 0 | 0 | 8.96221E-04 | 3.40383E-04 | 3.68342E-04 |
K/I | rs2303832 | 0.256 | None | N | 0.349 | 0.14 | None | gnomAD-2.1.1 | 2.86276E-02 | None | None | None | None | N | None | 4.96524E-03 | 3.352E-02 | None | 1.47173E-02 | 1.01674E-01 | None | 6.50412E-03 | None | 4.8133E-02 | 2.32443E-02 | 2.78324E-02 |
K/I | rs2303832 | 0.256 | None | N | 0.349 | 0.14 | None | gnomAD-3.1.2 | 2.13591E-02 | None | None | None | None | N | None | 4.61174E-03 | 2.31719E-02 | 3.07018E-02 | 1.90092E-02 | 9.42623E-02 | None | 4.48464E-02 | 6.32911E-03 | 2.29983E-02 | 8.07453E-03 | 2.15311E-02 |
K/I | rs2303832 | 0.256 | None | N | 0.349 | 0.14 | None | 1000 genomes | 2.95527E-02 | None | None | None | None | N | None | 8E-04 | 2.45E-02 | None | None | 9.92E-02 | 2.39E-02 | None | None | None | 6.1E-03 | None |
K/I | rs2303832 | 0.256 | None | N | 0.349 | 0.14 | None | gnomAD-4.0.0 | 2.35557E-02 | None | None | None | None | N | None | 4.402E-03 | 2.98493E-02 | None | 1.48669E-02 | 9.23238E-02 | None | 4.83014E-02 | 1.00793E-02 | 2.20499E-02 | 7.17047E-03 | 2.34778E-02 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3927 | ambiguous | 0.4688 | ambiguous | -0.936 | Destabilizing | 0.016 | N | 0.36 | neutral | None | None | None | None | N |
K/C | 0.5993 | likely_pathogenic | 0.6148 | pathogenic | -0.976 | Destabilizing | 0.864 | D | 0.521 | neutral | None | None | None | None | N |
K/D | 0.8796 | likely_pathogenic | 0.9062 | pathogenic | -0.053 | Destabilizing | 0.136 | N | 0.573 | neutral | None | None | None | None | N |
K/E | 0.3771 | ambiguous | 0.4321 | ambiguous | 0.084 | Stabilizing | 0.106 | N | 0.378 | neutral | D | 0.523360464 | None | None | N |
K/F | 0.6338 | likely_pathogenic | 0.7537 | pathogenic | -0.717 | Destabilizing | 0.072 | N | 0.573 | neutral | None | None | None | None | N |
K/G | 0.7042 | likely_pathogenic | 0.7513 | pathogenic | -1.305 | Destabilizing | 0.136 | N | 0.505 | neutral | None | None | None | None | N |
K/H | 0.4677 | ambiguous | 0.5282 | ambiguous | -1.611 | Destabilizing | 0.864 | D | 0.535 | neutral | None | None | None | None | N |
K/I | 0.0967 | likely_benign | 0.1168 | benign | 0.03 | Stabilizing | None | N | 0.349 | neutral | N | 0.510572127 | None | None | N |
K/L | 0.188 | likely_benign | 0.2518 | benign | 0.03 | Stabilizing | None | N | 0.327 | neutral | None | None | None | None | N |
K/M | 0.1327 | likely_benign | 0.1723 | benign | -0.054 | Destabilizing | 0.002 | N | 0.295 | neutral | None | None | None | None | N |
K/N | 0.6824 | likely_pathogenic | 0.759 | pathogenic | -0.566 | Destabilizing | 0.295 | N | 0.472 | neutral | N | 0.502369373 | None | None | N |
K/P | 0.8524 | likely_pathogenic | 0.9034 | pathogenic | -0.264 | Destabilizing | 0.628 | D | 0.574 | neutral | None | None | None | None | N |
K/Q | 0.2271 | likely_benign | 0.2523 | benign | -0.632 | Destabilizing | 0.295 | N | 0.471 | neutral | N | 0.511079106 | None | None | N |
K/R | 0.0907 | likely_benign | 0.0884 | benign | -0.554 | Destabilizing | 0.055 | N | 0.425 | neutral | N | 0.457470222 | None | None | N |
K/S | 0.6429 | likely_pathogenic | 0.7169 | pathogenic | -1.374 | Destabilizing | 0.072 | N | 0.375 | neutral | None | None | None | None | N |
K/T | 0.2244 | likely_benign | 0.2933 | benign | -1.01 | Destabilizing | 0.055 | N | 0.457 | neutral | N | 0.516105535 | None | None | N |
K/V | 0.1178 | likely_benign | 0.1574 | benign | -0.264 | Destabilizing | None | N | 0.322 | neutral | None | None | None | None | N |
K/W | 0.7588 | likely_pathogenic | 0.8132 | pathogenic | -0.515 | Destabilizing | 0.864 | D | 0.545 | neutral | None | None | None | None | N |
K/Y | 0.6276 | likely_pathogenic | 0.7203 | pathogenic | -0.205 | Destabilizing | 0.356 | N | 0.551 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.