Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17712 | 53359;53360;53361 | chr2:178607554;178607553;178607552 | chr2:179472281;179472280;179472279 |
N2AB | 16071 | 48436;48437;48438 | chr2:178607554;178607553;178607552 | chr2:179472281;179472280;179472279 |
N2A | 15144 | 45655;45656;45657 | chr2:178607554;178607553;178607552 | chr2:179472281;179472280;179472279 |
N2B | 8647 | 26164;26165;26166 | chr2:178607554;178607553;178607552 | chr2:179472281;179472280;179472279 |
Novex-1 | 8772 | 26539;26540;26541 | chr2:178607554;178607553;178607552 | chr2:179472281;179472280;179472279 |
Novex-2 | 8839 | 26740;26741;26742 | chr2:178607554;178607553;178607552 | chr2:179472281;179472280;179472279 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.007 | D | 0.193 | 0.241 | 0.343101102393 | gnomAD-4.0.0 | 1.59239E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86087E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1002 | likely_benign | 0.097 | benign | -0.043 | Destabilizing | 0.334 | N | 0.352 | neutral | N | 0.48530567 | None | None | N |
E/C | 0.5758 | likely_pathogenic | 0.6247 | pathogenic | -0.1 | Destabilizing | 0.992 | D | 0.359 | neutral | None | None | None | None | N |
E/D | 0.09 | likely_benign | 0.077 | benign | -0.209 | Destabilizing | 0.002 | N | 0.211 | neutral | N | 0.484438878 | None | None | N |
E/F | 0.4514 | ambiguous | 0.4791 | ambiguous | -0.021 | Destabilizing | 0.972 | D | 0.349 | neutral | None | None | None | None | N |
E/G | 0.1223 | likely_benign | 0.128 | benign | -0.177 | Destabilizing | 0.549 | D | 0.358 | neutral | N | 0.500433358 | None | None | N |
E/H | 0.2811 | likely_benign | 0.2992 | benign | 0.501 | Stabilizing | 0.92 | D | 0.388 | neutral | None | None | None | None | N |
E/I | 0.1495 | likely_benign | 0.1569 | benign | 0.256 | Stabilizing | 0.85 | D | 0.357 | neutral | None | None | None | None | N |
E/K | 0.1 | likely_benign | 0.1125 | benign | 0.497 | Stabilizing | 0.007 | N | 0.193 | neutral | D | 0.53113396 | None | None | N |
E/L | 0.2059 | likely_benign | 0.221 | benign | 0.256 | Stabilizing | 0.617 | D | 0.355 | neutral | None | None | None | None | N |
E/M | 0.231 | likely_benign | 0.258 | benign | 0.082 | Stabilizing | 0.992 | D | 0.328 | neutral | None | None | None | None | N |
E/N | 0.139 | likely_benign | 0.13 | benign | 0.212 | Stabilizing | 0.447 | N | 0.31 | neutral | None | None | None | None | N |
E/P | 0.2694 | likely_benign | 0.2411 | benign | 0.175 | Stabilizing | 0.766 | D | 0.37 | neutral | None | None | None | None | N |
E/Q | 0.1061 | likely_benign | 0.1112 | benign | 0.238 | Stabilizing | 0.016 | N | 0.257 | neutral | D | 0.522034474 | None | None | N |
E/R | 0.1882 | likely_benign | 0.2108 | benign | 0.707 | Stabilizing | 0.447 | N | 0.307 | neutral | None | None | None | None | N |
E/S | 0.1261 | likely_benign | 0.1212 | benign | 0.074 | Stabilizing | 0.25 | N | 0.36 | neutral | None | None | None | None | N |
E/T | 0.1221 | likely_benign | 0.1238 | benign | 0.193 | Stabilizing | 0.021 | N | 0.233 | neutral | None | None | None | None | N |
E/V | 0.1061 | likely_benign | 0.1058 | benign | 0.175 | Stabilizing | 0.549 | D | 0.367 | neutral | N | 0.512126912 | None | None | N |
E/W | 0.7288 | likely_pathogenic | 0.785 | pathogenic | 0.051 | Stabilizing | 0.992 | D | 0.413 | neutral | None | None | None | None | N |
E/Y | 0.3713 | ambiguous | 0.4072 | ambiguous | 0.211 | Stabilizing | 0.972 | D | 0.348 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.