Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17713 | 53362;53363;53364 | chr2:178607551;178607550;178607549 | chr2:179472278;179472277;179472276 |
N2AB | 16072 | 48439;48440;48441 | chr2:178607551;178607550;178607549 | chr2:179472278;179472277;179472276 |
N2A | 15145 | 45658;45659;45660 | chr2:178607551;178607550;178607549 | chr2:179472278;179472277;179472276 |
N2B | 8648 | 26167;26168;26169 | chr2:178607551;178607550;178607549 | chr2:179472278;179472277;179472276 |
Novex-1 | 8773 | 26542;26543;26544 | chr2:178607551;178607550;178607549 | chr2:179472278;179472277;179472276 |
Novex-2 | 8840 | 26743;26744;26745 | chr2:178607551;178607550;178607549 | chr2:179472278;179472277;179472276 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1008171003 | None | 0.051 | N | 0.227 | 0.166 | 0.20549828249 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/V | rs1008171003 | None | 0.051 | N | 0.227 | 0.166 | 0.20549828249 | gnomAD-4.0.0 | 2.56432E-06 | None | None | None | None | N | None | 0 | 1.69572E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 2.84706E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4437 | ambiguous | 0.5494 | ambiguous | -1.675 | Destabilizing | 0.688 | D | 0.455 | neutral | None | None | None | None | N |
L/C | 0.7737 | likely_pathogenic | 0.8353 | pathogenic | -1.177 | Destabilizing | 0.998 | D | 0.509 | neutral | None | None | None | None | N |
L/D | 0.8989 | likely_pathogenic | 0.9366 | pathogenic | -0.908 | Destabilizing | 0.974 | D | 0.579 | neutral | None | None | None | None | N |
L/E | 0.727 | likely_pathogenic | 0.8219 | pathogenic | -0.865 | Destabilizing | 0.974 | D | 0.568 | neutral | None | None | None | None | N |
L/F | 0.2869 | likely_benign | 0.2902 | benign | -1.077 | Destabilizing | 0.949 | D | 0.511 | neutral | None | None | None | None | N |
L/G | 0.805 | likely_pathogenic | 0.8767 | pathogenic | -2.038 | Highly Destabilizing | 0.974 | D | 0.563 | neutral | None | None | None | None | N |
L/H | 0.7091 | likely_pathogenic | 0.8115 | pathogenic | -1.205 | Destabilizing | 0.998 | D | 0.589 | neutral | None | None | None | None | N |
L/I | 0.0956 | likely_benign | 0.0994 | benign | -0.736 | Destabilizing | 0.016 | N | 0.369 | neutral | None | None | None | None | N |
L/K | 0.7114 | likely_pathogenic | 0.8193 | pathogenic | -1.169 | Destabilizing | 0.974 | D | 0.54 | neutral | None | None | None | None | N |
L/M | 0.1628 | likely_benign | 0.1739 | benign | -0.714 | Destabilizing | 0.934 | D | 0.54 | neutral | N | 0.507092025 | None | None | N |
L/N | 0.7561 | likely_pathogenic | 0.8434 | pathogenic | -1.042 | Destabilizing | 0.991 | D | 0.611 | neutral | None | None | None | None | N |
L/P | 0.2944 | likely_benign | 0.3884 | ambiguous | -1.019 | Destabilizing | 0.005 | N | 0.41 | neutral | N | 0.511556482 | None | None | N |
L/Q | 0.6063 | likely_pathogenic | 0.7383 | pathogenic | -1.124 | Destabilizing | 0.989 | D | 0.57 | neutral | N | 0.49653038 | None | None | N |
L/R | 0.6641 | likely_pathogenic | 0.7742 | pathogenic | -0.678 | Destabilizing | 0.989 | D | 0.569 | neutral | N | 0.504835266 | None | None | N |
L/S | 0.72 | likely_pathogenic | 0.832 | pathogenic | -1.712 | Destabilizing | 0.915 | D | 0.515 | neutral | None | None | None | None | N |
L/T | 0.3871 | ambiguous | 0.5036 | ambiguous | -1.53 | Destabilizing | 0.842 | D | 0.481 | neutral | None | None | None | None | N |
L/V | 0.1342 | likely_benign | 0.1441 | benign | -1.019 | Destabilizing | 0.051 | N | 0.227 | neutral | N | 0.453217468 | None | None | N |
L/W | 0.5017 | ambiguous | 0.561 | ambiguous | -1.142 | Destabilizing | 0.998 | D | 0.586 | neutral | None | None | None | None | N |
L/Y | 0.671 | likely_pathogenic | 0.7238 | pathogenic | -0.926 | Destabilizing | 0.991 | D | 0.563 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.