Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17716 | 53371;53372;53373 | chr2:178607542;178607541;178607540 | chr2:179472269;179472268;179472267 |
N2AB | 16075 | 48448;48449;48450 | chr2:178607542;178607541;178607540 | chr2:179472269;179472268;179472267 |
N2A | 15148 | 45667;45668;45669 | chr2:178607542;178607541;178607540 | chr2:179472269;179472268;179472267 |
N2B | 8651 | 26176;26177;26178 | chr2:178607542;178607541;178607540 | chr2:179472269;179472268;179472267 |
Novex-1 | 8776 | 26551;26552;26553 | chr2:178607542;178607541;178607540 | chr2:179472269;179472268;179472267 |
Novex-2 | 8843 | 26752;26753;26754 | chr2:178607542;178607541;178607540 | chr2:179472269;179472268;179472267 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1576363473 | None | 0.638 | N | 0.515 | 0.205 | 0.219573609325 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07555E-04 | 0 |
D/N | rs1576363473 | None | 0.638 | N | 0.515 | 0.205 | 0.219573609325 | gnomAD-4.0.0 | 6.58033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.07555E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.146 | likely_benign | 0.1136 | benign | -0.005 | Destabilizing | 0.201 | N | 0.44 | neutral | N | 0.488147534 | None | None | N |
D/C | 0.5239 | ambiguous | 0.5101 | ambiguous | -0.048 | Destabilizing | 0.982 | D | 0.647 | neutral | None | None | None | None | N |
D/E | 0.1213 | likely_benign | 0.0916 | benign | -0.224 | Destabilizing | 0.001 | N | 0.235 | neutral | N | 0.460267499 | None | None | N |
D/F | 0.5767 | likely_pathogenic | 0.5174 | ambiguous | -0.12 | Destabilizing | 0.982 | D | 0.596 | neutral | None | None | None | None | N |
D/G | 0.1233 | likely_benign | 0.1042 | benign | -0.12 | Destabilizing | 0.334 | N | 0.489 | neutral | N | 0.464691884 | None | None | N |
D/H | 0.2607 | likely_benign | 0.2398 | benign | 0.403 | Stabilizing | 0.931 | D | 0.551 | neutral | N | 0.462315159 | None | None | N |
D/I | 0.3508 | ambiguous | 0.3029 | benign | 0.231 | Stabilizing | 0.826 | D | 0.608 | neutral | None | None | None | None | N |
D/K | 0.2425 | likely_benign | 0.231 | benign | 0.429 | Stabilizing | 0.25 | N | 0.488 | neutral | None | None | None | None | N |
D/L | 0.3273 | likely_benign | 0.2916 | benign | 0.231 | Stabilizing | 0.7 | D | 0.59 | neutral | None | None | None | None | N |
D/M | 0.5372 | ambiguous | 0.4472 | ambiguous | 0.102 | Stabilizing | 0.982 | D | 0.613 | neutral | None | None | None | None | N |
D/N | 0.0967 | likely_benign | 0.0862 | benign | 0.262 | Stabilizing | 0.638 | D | 0.515 | neutral | N | 0.510504319 | None | None | N |
D/P | 0.6086 | likely_pathogenic | 0.557 | ambiguous | 0.171 | Stabilizing | 0.826 | D | 0.537 | neutral | None | None | None | None | N |
D/Q | 0.2429 | likely_benign | 0.2145 | benign | 0.257 | Stabilizing | 0.539 | D | 0.537 | neutral | None | None | None | None | N |
D/R | 0.3429 | ambiguous | 0.3299 | benign | 0.627 | Stabilizing | 0.539 | D | 0.533 | neutral | None | None | None | None | N |
D/S | 0.1121 | likely_benign | 0.0908 | benign | 0.143 | Stabilizing | 0.25 | N | 0.473 | neutral | None | None | None | None | N |
D/T | 0.2022 | likely_benign | 0.1607 | benign | 0.235 | Stabilizing | 0.7 | D | 0.517 | neutral | None | None | None | None | N |
D/V | 0.1992 | likely_benign | 0.1694 | benign | 0.171 | Stabilizing | 0.638 | D | 0.597 | neutral | N | 0.477963879 | None | None | N |
D/W | 0.8034 | likely_pathogenic | 0.7957 | pathogenic | -0.084 | Destabilizing | 0.982 | D | 0.656 | neutral | None | None | None | None | N |
D/Y | 0.2149 | likely_benign | 0.2283 | benign | 0.102 | Stabilizing | 0.976 | D | 0.594 | neutral | N | 0.473671465 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.