Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17725 | 53398;53399;53400 | chr2:178607515;178607514;178607513 | chr2:179472242;179472241;179472240 |
N2AB | 16084 | 48475;48476;48477 | chr2:178607515;178607514;178607513 | chr2:179472242;179472241;179472240 |
N2A | 15157 | 45694;45695;45696 | chr2:178607515;178607514;178607513 | chr2:179472242;179472241;179472240 |
N2B | 8660 | 26203;26204;26205 | chr2:178607515;178607514;178607513 | chr2:179472242;179472241;179472240 |
Novex-1 | 8785 | 26578;26579;26580 | chr2:178607515;178607514;178607513 | chr2:179472242;179472241;179472240 |
Novex-2 | 8852 | 26779;26780;26781 | chr2:178607515;178607514;178607513 | chr2:179472242;179472241;179472240 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.927 | N | 0.447 | 0.278 | 0.437207349437 | gnomAD-4.0.0 | 1.59231E-06 | None | None | None | None | N | None | 0 | 2.28686E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0975 | likely_benign | 0.0943 | benign | -0.446 | Destabilizing | 0.27 | N | 0.247 | neutral | N | 0.496095879 | None | None | N |
T/C | 0.4616 | ambiguous | 0.4965 | ambiguous | -0.289 | Destabilizing | 0.995 | D | 0.452 | neutral | None | None | None | None | N |
T/D | 0.3036 | likely_benign | 0.2709 | benign | 0.418 | Stabilizing | 0.007 | N | 0.259 | neutral | None | None | None | None | N |
T/E | 0.2718 | likely_benign | 0.2307 | benign | 0.363 | Stabilizing | 0.329 | N | 0.399 | neutral | None | None | None | None | N |
T/F | 0.3214 | likely_benign | 0.3197 | benign | -0.829 | Destabilizing | 0.981 | D | 0.49 | neutral | None | None | None | None | N |
T/G | 0.2369 | likely_benign | 0.2331 | benign | -0.611 | Destabilizing | 0.495 | N | 0.475 | neutral | None | None | None | None | N |
T/H | 0.2618 | likely_benign | 0.2658 | benign | -0.926 | Destabilizing | 0.944 | D | 0.489 | neutral | None | None | None | None | N |
T/I | 0.2345 | likely_benign | 0.227 | benign | -0.126 | Destabilizing | 0.927 | D | 0.447 | neutral | N | 0.513606992 | None | None | N |
T/K | 0.1692 | likely_benign | 0.1523 | benign | -0.337 | Destabilizing | 0.007 | N | 0.271 | neutral | None | None | None | None | N |
T/L | 0.1158 | likely_benign | 0.1139 | benign | -0.126 | Destabilizing | 0.704 | D | 0.393 | neutral | None | None | None | None | N |
T/M | 0.1039 | likely_benign | 0.0986 | benign | 0.035 | Stabilizing | 0.981 | D | 0.453 | neutral | None | None | None | None | N |
T/N | 0.1 | likely_benign | 0.0964 | benign | -0.167 | Destabilizing | 0.023 | N | 0.191 | neutral | N | 0.44382162 | None | None | N |
T/P | 0.1158 | likely_benign | 0.1107 | benign | -0.202 | Destabilizing | 0.784 | D | 0.441 | neutral | N | 0.491788925 | None | None | N |
T/Q | 0.1794 | likely_benign | 0.1706 | benign | -0.355 | Destabilizing | 0.085 | N | 0.281 | neutral | None | None | None | None | N |
T/R | 0.1577 | likely_benign | 0.1497 | benign | -0.138 | Destabilizing | 0.543 | D | 0.399 | neutral | None | None | None | None | N |
T/S | 0.1135 | likely_benign | 0.1053 | benign | -0.438 | Destabilizing | 0.029 | N | 0.189 | neutral | N | 0.449382155 | None | None | N |
T/V | 0.1817 | likely_benign | 0.1759 | benign | -0.202 | Destabilizing | 0.828 | D | 0.261 | neutral | None | None | None | None | N |
T/W | 0.5941 | likely_pathogenic | 0.6154 | pathogenic | -0.805 | Destabilizing | 0.995 | D | 0.519 | neutral | None | None | None | None | N |
T/Y | 0.2921 | likely_benign | 0.3292 | benign | -0.529 | Destabilizing | 0.981 | D | 0.489 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.