Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17729 | 53410;53411;53412 | chr2:178607503;178607502;178607501 | chr2:179472230;179472229;179472228 |
N2AB | 16088 | 48487;48488;48489 | chr2:178607503;178607502;178607501 | chr2:179472230;179472229;179472228 |
N2A | 15161 | 45706;45707;45708 | chr2:178607503;178607502;178607501 | chr2:179472230;179472229;179472228 |
N2B | 8664 | 26215;26216;26217 | chr2:178607503;178607502;178607501 | chr2:179472230;179472229;179472228 |
Novex-1 | 8789 | 26590;26591;26592 | chr2:178607503;178607502;178607501 | chr2:179472230;179472229;179472228 |
Novex-2 | 8856 | 26791;26792;26793 | chr2:178607503;178607502;178607501 | chr2:179472230;179472229;179472228 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs767559716 | -1.485 | 0.198 | N | 0.387 | 0.381 | 0.510872562601 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/V | rs767559716 | -1.485 | 0.198 | N | 0.387 | 0.381 | 0.510872562601 | gnomAD-4.0.0 | 6.84397E-07 | None | None | None | None | N | None | 0 | 2.23664E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8999 | likely_pathogenic | 0.9052 | pathogenic | -2.636 | Highly Destabilizing | 0.983 | D | 0.705 | prob.neutral | None | None | None | None | N |
L/C | 0.8938 | likely_pathogenic | 0.8871 | pathogenic | -1.851 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
L/D | 0.9995 | likely_pathogenic | 0.9997 | pathogenic | -3.507 | Highly Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
L/E | 0.9966 | likely_pathogenic | 0.998 | pathogenic | -3.195 | Highly Destabilizing | 0.999 | D | 0.83 | deleterious | None | None | None | None | N |
L/F | 0.7349 | likely_pathogenic | 0.6605 | pathogenic | -1.703 | Destabilizing | 0.998 | D | 0.66 | neutral | None | None | None | None | N |
L/G | 0.9855 | likely_pathogenic | 0.9886 | pathogenic | -3.196 | Highly Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
L/H | 0.9936 | likely_pathogenic | 0.9956 | pathogenic | -2.998 | Highly Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
L/I | 0.2034 | likely_benign | 0.2088 | benign | -0.937 | Destabilizing | 0.9 | D | 0.64 | neutral | N | 0.501757393 | None | None | N |
L/K | 0.9928 | likely_pathogenic | 0.9957 | pathogenic | -2.247 | Highly Destabilizing | 0.999 | D | 0.792 | deleterious | None | None | None | None | N |
L/M | 0.3129 | likely_benign | 0.2911 | benign | -1.111 | Destabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | N |
L/N | 0.9958 | likely_pathogenic | 0.9976 | pathogenic | -3.037 | Highly Destabilizing | 0.999 | D | 0.832 | deleterious | None | None | None | None | N |
L/P | 0.9971 | likely_pathogenic | 0.9983 | pathogenic | -1.498 | Destabilizing | 0.999 | D | 0.833 | deleterious | D | 0.565695398 | None | None | N |
L/Q | 0.9876 | likely_pathogenic | 0.9922 | pathogenic | -2.647 | Highly Destabilizing | 0.999 | D | 0.798 | deleterious | D | 0.565695398 | None | None | N |
L/R | 0.9875 | likely_pathogenic | 0.9914 | pathogenic | -2.388 | Highly Destabilizing | 0.999 | D | 0.794 | deleterious | D | 0.565695398 | None | None | N |
L/S | 0.995 | likely_pathogenic | 0.9966 | pathogenic | -3.452 | Highly Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
L/T | 0.973 | likely_pathogenic | 0.9829 | pathogenic | -2.982 | Highly Destabilizing | 0.983 | D | 0.715 | prob.delet. | None | None | None | None | N |
L/V | 0.2298 | likely_benign | 0.2372 | benign | -1.498 | Destabilizing | 0.198 | N | 0.387 | neutral | N | 0.516356156 | None | None | N |
L/W | 0.9744 | likely_pathogenic | 0.9726 | pathogenic | -2.054 | Highly Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
L/Y | 0.9658 | likely_pathogenic | 0.9626 | pathogenic | -1.889 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.