Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17733 | 53422;53423;53424 | chr2:178607491;178607490;178607489 | chr2:179472218;179472217;179472216 |
N2AB | 16092 | 48499;48500;48501 | chr2:178607491;178607490;178607489 | chr2:179472218;179472217;179472216 |
N2A | 15165 | 45718;45719;45720 | chr2:178607491;178607490;178607489 | chr2:179472218;179472217;179472216 |
N2B | 8668 | 26227;26228;26229 | chr2:178607491;178607490;178607489 | chr2:179472218;179472217;179472216 |
Novex-1 | 8793 | 26602;26603;26604 | chr2:178607491;178607490;178607489 | chr2:179472218;179472217;179472216 |
Novex-2 | 8860 | 26803;26804;26805 | chr2:178607491;178607490;178607489 | chr2:179472218;179472217;179472216 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | None | N | 0.146 | 0.098 | 0.101711395817 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2017 | likely_benign | 0.1982 | benign | -0.533 | Destabilizing | 0.005 | N | 0.219 | neutral | N | 0.474738306 | None | None | N |
D/C | 0.5721 | likely_pathogenic | 0.6185 | pathogenic | -0.003 | Destabilizing | 0.356 | N | 0.392 | neutral | None | None | None | None | N |
D/E | 0.1611 | likely_benign | 0.1301 | benign | -0.435 | Destabilizing | None | N | 0.146 | neutral | N | 0.439124223 | None | None | N |
D/F | 0.603 | likely_pathogenic | 0.6103 | pathogenic | -0.486 | Destabilizing | 0.356 | N | 0.471 | neutral | None | None | None | None | N |
D/G | 0.1543 | likely_benign | 0.1686 | benign | -0.767 | Destabilizing | 0.005 | N | 0.219 | neutral | N | 0.461019648 | None | None | N |
D/H | 0.2385 | likely_benign | 0.2631 | benign | -0.606 | Destabilizing | 0.171 | N | 0.359 | neutral | N | 0.496537731 | None | None | N |
D/I | 0.5393 | ambiguous | 0.5372 | ambiguous | 0.051 | Stabilizing | 0.072 | N | 0.51 | neutral | None | None | None | None | N |
D/K | 0.3265 | likely_benign | 0.3586 | ambiguous | 0.069 | Stabilizing | 0.016 | N | 0.287 | neutral | None | None | None | None | N |
D/L | 0.4492 | ambiguous | 0.4692 | ambiguous | 0.051 | Stabilizing | 0.031 | N | 0.347 | neutral | None | None | None | None | N |
D/M | 0.6184 | likely_pathogenic | 0.6338 | pathogenic | 0.422 | Stabilizing | 0.628 | D | 0.407 | neutral | None | None | None | None | N |
D/N | 0.0722 | likely_benign | 0.0757 | benign | -0.243 | Destabilizing | None | N | 0.095 | neutral | N | 0.420919677 | None | None | N |
D/P | 0.8079 | likely_pathogenic | 0.8592 | pathogenic | -0.121 | Destabilizing | 0.136 | N | 0.381 | neutral | None | None | None | None | N |
D/Q | 0.298 | likely_benign | 0.3005 | benign | -0.199 | Destabilizing | 0.038 | N | 0.149 | neutral | None | None | None | None | N |
D/R | 0.4124 | ambiguous | 0.4501 | ambiguous | 0.147 | Stabilizing | 0.031 | N | 0.376 | neutral | None | None | None | None | N |
D/S | 0.1429 | likely_benign | 0.1521 | benign | -0.384 | Destabilizing | None | N | 0.147 | neutral | None | None | None | None | N |
D/T | 0.2491 | likely_benign | 0.275 | benign | -0.199 | Destabilizing | None | N | 0.159 | neutral | None | None | None | None | N |
D/V | 0.336 | likely_benign | 0.3238 | benign | -0.121 | Destabilizing | 0.024 | N | 0.35 | neutral | N | 0.461772182 | None | None | N |
D/W | 0.8539 | likely_pathogenic | 0.876 | pathogenic | -0.338 | Destabilizing | 0.864 | D | 0.404 | neutral | None | None | None | None | N |
D/Y | 0.1911 | likely_benign | 0.2134 | benign | -0.257 | Destabilizing | 0.56 | D | 0.474 | neutral | N | 0.473276869 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.