Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1774 | 5545;5546;5547 | chr2:178776544;178776543;178776542 | chr2:179641271;179641270;179641269 |
N2AB | 1774 | 5545;5546;5547 | chr2:178776544;178776543;178776542 | chr2:179641271;179641270;179641269 |
N2A | 1774 | 5545;5546;5547 | chr2:178776544;178776543;178776542 | chr2:179641271;179641270;179641269 |
N2B | 1728 | 5407;5408;5409 | chr2:178776544;178776543;178776542 | chr2:179641271;179641270;179641269 |
Novex-1 | 1728 | 5407;5408;5409 | chr2:178776544;178776543;178776542 | chr2:179641271;179641270;179641269 |
Novex-2 | 1728 | 5407;5408;5409 | chr2:178776544;178776543;178776542 | chr2:179641271;179641270;179641269 |
Novex-3 | 1774 | 5545;5546;5547 | chr2:178776544;178776543;178776542 | chr2:179641271;179641270;179641269 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs758207512 | -0.437 | None | N | 0.177 | 0.126 | 0.349870743963 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.558 | ambiguous | 0.5488 | ambiguous | -1.293 | Destabilizing | 0.035 | N | 0.419 | neutral | None | None | None | None | I |
I/C | 0.8299 | likely_pathogenic | 0.8238 | pathogenic | -0.728 | Destabilizing | 0.824 | D | 0.583 | neutral | None | None | None | None | I |
I/D | 0.8954 | likely_pathogenic | 0.9056 | pathogenic | -1.0 | Destabilizing | 0.555 | D | 0.616 | neutral | None | None | None | None | I |
I/E | 0.81 | likely_pathogenic | 0.8231 | pathogenic | -1.07 | Destabilizing | 0.555 | D | 0.608 | neutral | None | None | None | None | I |
I/F | 0.3488 | ambiguous | 0.3561 | ambiguous | -1.28 | Destabilizing | 0.317 | N | 0.518 | neutral | N | 0.51273392 | None | None | I |
I/G | 0.7982 | likely_pathogenic | 0.7968 | pathogenic | -1.529 | Destabilizing | 0.262 | N | 0.583 | neutral | None | None | None | None | I |
I/H | 0.7788 | likely_pathogenic | 0.7923 | pathogenic | -0.829 | Destabilizing | 0.935 | D | 0.609 | neutral | None | None | None | None | I |
I/K | 0.7448 | likely_pathogenic | 0.7683 | pathogenic | -0.65 | Destabilizing | 0.555 | D | 0.608 | neutral | None | None | None | None | I |
I/L | 0.1922 | likely_benign | 0.1928 | benign | -0.754 | Destabilizing | 0.005 | N | 0.307 | neutral | N | 0.501101369 | None | None | I |
I/M | 0.1604 | likely_benign | 0.1664 | benign | -0.394 | Destabilizing | 0.317 | N | 0.559 | neutral | N | 0.507636492 | None | None | I |
I/N | 0.4689 | ambiguous | 0.5047 | ambiguous | -0.396 | Destabilizing | 0.741 | D | 0.62 | neutral | N | 0.505690121 | None | None | I |
I/P | 0.9206 | likely_pathogenic | 0.9254 | pathogenic | -0.902 | Destabilizing | 0.791 | D | 0.622 | neutral | None | None | None | None | I |
I/Q | 0.6965 | likely_pathogenic | 0.7176 | pathogenic | -0.712 | Destabilizing | 0.791 | D | 0.625 | neutral | None | None | None | None | I |
I/R | 0.7004 | likely_pathogenic | 0.7153 | pathogenic | -0.022 | Destabilizing | 0.555 | D | 0.619 | neutral | None | None | None | None | I |
I/S | 0.5261 | ambiguous | 0.5336 | ambiguous | -0.922 | Destabilizing | 0.117 | N | 0.581 | neutral | N | 0.496782521 | None | None | I |
I/T | 0.3599 | ambiguous | 0.369 | ambiguous | -0.886 | Destabilizing | 0.062 | N | 0.496 | neutral | N | 0.412275645 | None | None | I |
I/V | 0.0596 | likely_benign | 0.0587 | benign | -0.902 | Destabilizing | None | N | 0.177 | neutral | N | 0.45421318 | None | None | I |
I/W | 0.9448 | likely_pathogenic | 0.9459 | pathogenic | -1.296 | Destabilizing | 0.935 | D | 0.62 | neutral | None | None | None | None | I |
I/Y | 0.7453 | likely_pathogenic | 0.7661 | pathogenic | -1.025 | Destabilizing | 0.555 | D | 0.597 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.