Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17741 | 53446;53447;53448 | chr2:178607467;178607466;178607465 | chr2:179472194;179472193;179472192 |
N2AB | 16100 | 48523;48524;48525 | chr2:178607467;178607466;178607465 | chr2:179472194;179472193;179472192 |
N2A | 15173 | 45742;45743;45744 | chr2:178607467;178607466;178607465 | chr2:179472194;179472193;179472192 |
N2B | 8676 | 26251;26252;26253 | chr2:178607467;178607466;178607465 | chr2:179472194;179472193;179472192 |
Novex-1 | 8801 | 26626;26627;26628 | chr2:178607467;178607466;178607465 | chr2:179472194;179472193;179472192 |
Novex-2 | 8868 | 26827;26828;26829 | chr2:178607467;178607466;178607465 | chr2:179472194;179472193;179472192 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs1189355872 | None | 0.959 | N | 0.525 | 0.452 | 0.692629309879 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/G | rs1189355872 | None | 0.959 | N | 0.525 | 0.452 | 0.692629309879 | gnomAD-4.0.0 | 6.578E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47167E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7105 | likely_pathogenic | 0.6438 | pathogenic | -0.74 | Destabilizing | 0.863 | D | 0.513 | neutral | None | None | None | None | I |
R/C | 0.2932 | likely_benign | 0.2483 | benign | -0.7 | Destabilizing | 0.999 | D | 0.546 | neutral | None | None | None | None | I |
R/D | 0.8646 | likely_pathogenic | 0.8359 | pathogenic | 0.031 | Stabilizing | 0.969 | D | 0.543 | neutral | None | None | None | None | I |
R/E | 0.6461 | likely_pathogenic | 0.6056 | pathogenic | 0.174 | Stabilizing | 0.863 | D | 0.546 | neutral | None | None | None | None | I |
R/F | 0.723 | likely_pathogenic | 0.6651 | pathogenic | -0.423 | Destabilizing | 0.997 | D | 0.561 | neutral | None | None | None | None | I |
R/G | 0.6307 | likely_pathogenic | 0.549 | ambiguous | -1.075 | Destabilizing | 0.959 | D | 0.525 | neutral | N | 0.488770656 | None | None | I |
R/H | 0.1728 | likely_benign | 0.1483 | benign | -1.324 | Destabilizing | 0.997 | D | 0.575 | neutral | None | None | None | None | I |
R/I | 0.3427 | ambiguous | 0.3101 | benign | 0.169 | Stabilizing | 0.996 | D | 0.563 | neutral | N | 0.408671683 | None | None | I |
R/K | 0.1568 | likely_benign | 0.1434 | benign | -0.754 | Destabilizing | 0.021 | N | 0.204 | neutral | N | 0.387736263 | None | None | I |
R/L | 0.3692 | ambiguous | 0.3222 | benign | 0.169 | Stabilizing | 0.969 | D | 0.525 | neutral | None | None | None | None | I |
R/M | 0.4175 | ambiguous | 0.3823 | ambiguous | -0.255 | Destabilizing | 0.997 | D | 0.569 | neutral | None | None | None | None | I |
R/N | 0.7493 | likely_pathogenic | 0.7007 | pathogenic | -0.248 | Destabilizing | 0.969 | D | 0.55 | neutral | None | None | None | None | I |
R/P | 0.8928 | likely_pathogenic | 0.8259 | pathogenic | -0.112 | Destabilizing | 0.997 | D | 0.557 | neutral | None | None | None | None | I |
R/Q | 0.1833 | likely_benign | 0.1624 | benign | -0.354 | Destabilizing | 0.939 | D | 0.576 | neutral | None | None | None | None | I |
R/S | 0.7523 | likely_pathogenic | 0.6879 | pathogenic | -1.011 | Destabilizing | 0.92 | D | 0.525 | neutral | N | 0.455924125 | None | None | I |
R/T | 0.4404 | ambiguous | 0.3823 | ambiguous | -0.677 | Destabilizing | 0.959 | D | 0.538 | neutral | N | 0.421792909 | None | None | I |
R/V | 0.4996 | ambiguous | 0.4495 | ambiguous | -0.112 | Destabilizing | 0.991 | D | 0.53 | neutral | None | None | None | None | I |
R/W | 0.2771 | likely_benign | 0.2413 | benign | -0.052 | Destabilizing | 0.999 | D | 0.569 | neutral | None | None | None | None | I |
R/Y | 0.5473 | ambiguous | 0.4765 | ambiguous | 0.218 | Stabilizing | 0.997 | D | 0.578 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.