Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17742 | 53449;53450;53451 | chr2:178607464;178607463;178607462 | chr2:179472191;179472190;179472189 |
N2AB | 16101 | 48526;48527;48528 | chr2:178607464;178607463;178607462 | chr2:179472191;179472190;179472189 |
N2A | 15174 | 45745;45746;45747 | chr2:178607464;178607463;178607462 | chr2:179472191;179472190;179472189 |
N2B | 8677 | 26254;26255;26256 | chr2:178607464;178607463;178607462 | chr2:179472191;179472190;179472189 |
Novex-1 | 8802 | 26629;26630;26631 | chr2:178607464;178607463;178607462 | chr2:179472191;179472190;179472189 |
Novex-2 | 8869 | 26830;26831;26832 | chr2:178607464;178607463;178607462 | chr2:179472191;179472190;179472189 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.819 | 0.821 | 0.892054323885 | gnomAD-4.0.0 | 1.59243E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02773E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9978 | likely_pathogenic | 0.997 | pathogenic | -2.098 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Y/C | 0.9682 | likely_pathogenic | 0.9525 | pathogenic | -1.538 | Destabilizing | 1.0 | D | 0.819 | deleterious | D | 0.650869585 | None | None | N |
Y/D | 0.9979 | likely_pathogenic | 0.9969 | pathogenic | -2.858 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.650869585 | None | None | N |
Y/E | 0.9992 | likely_pathogenic | 0.9989 | pathogenic | -2.61 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Y/F | 0.2265 | likely_benign | 0.1838 | benign | -0.673 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | D | 0.603609795 | None | None | N |
Y/G | 0.9949 | likely_pathogenic | 0.9931 | pathogenic | -2.548 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
Y/H | 0.9819 | likely_pathogenic | 0.9732 | pathogenic | -1.939 | Destabilizing | 1.0 | D | 0.793 | deleterious | D | 0.634648419 | None | None | N |
Y/I | 0.9496 | likely_pathogenic | 0.9333 | pathogenic | -0.617 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Y/K | 0.9989 | likely_pathogenic | 0.9985 | pathogenic | -1.894 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Y/L | 0.9168 | likely_pathogenic | 0.9022 | pathogenic | -0.617 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
Y/M | 0.9818 | likely_pathogenic | 0.9759 | pathogenic | -0.706 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
Y/N | 0.9906 | likely_pathogenic | 0.9863 | pathogenic | -2.852 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | D | 0.650869585 | None | None | N |
Y/P | 0.9991 | likely_pathogenic | 0.9988 | pathogenic | -1.125 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
Y/Q | 0.9991 | likely_pathogenic | 0.9987 | pathogenic | -2.367 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
Y/R | 0.9965 | likely_pathogenic | 0.9952 | pathogenic | -2.233 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
Y/S | 0.9957 | likely_pathogenic | 0.9938 | pathogenic | -3.132 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | D | 0.650869585 | None | None | N |
Y/T | 0.9976 | likely_pathogenic | 0.9966 | pathogenic | -2.734 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Y/V | 0.946 | likely_pathogenic | 0.928 | pathogenic | -1.125 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
Y/W | 0.7945 | likely_pathogenic | 0.7486 | pathogenic | -0.092 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.