Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17746 | 53461;53462;53463 | chr2:178607452;178607451;178607450 | chr2:179472179;179472178;179472177 |
N2AB | 16105 | 48538;48539;48540 | chr2:178607452;178607451;178607450 | chr2:179472179;179472178;179472177 |
N2A | 15178 | 45757;45758;45759 | chr2:178607452;178607451;178607450 | chr2:179472179;179472178;179472177 |
N2B | 8681 | 26266;26267;26268 | chr2:178607452;178607451;178607450 | chr2:179472179;179472178;179472177 |
Novex-1 | 8806 | 26641;26642;26643 | chr2:178607452;178607451;178607450 | chr2:179472179;179472178;179472177 |
Novex-2 | 8873 | 26842;26843;26844 | chr2:178607452;178607451;178607450 | chr2:179472179;179472178;179472177 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs886055266 | None | 0.989 | D | 0.667 | 0.683 | 0.68099412893 | gnomAD-4.0.0 | 1.59247E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77716E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8721 | likely_pathogenic | 0.8495 | pathogenic | -1.16 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
A/D | 0.997 | likely_pathogenic | 0.9973 | pathogenic | -1.749 | Destabilizing | 0.998 | D | 0.809 | deleterious | D | 0.636678975 | None | None | I |
A/E | 0.9941 | likely_pathogenic | 0.9945 | pathogenic | -1.786 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
A/F | 0.9868 | likely_pathogenic | 0.9808 | pathogenic | -1.182 | Destabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | I |
A/G | 0.3255 | likely_benign | 0.3357 | benign | -1.206 | Destabilizing | 0.217 | N | 0.353 | neutral | D | 0.545034659 | None | None | I |
A/H | 0.9983 | likely_pathogenic | 0.9979 | pathogenic | -1.375 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
A/I | 0.9064 | likely_pathogenic | 0.8663 | pathogenic | -0.463 | Destabilizing | 0.995 | D | 0.762 | deleterious | None | None | None | None | I |
A/K | 0.9989 | likely_pathogenic | 0.9988 | pathogenic | -1.242 | Destabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | I |
A/L | 0.8279 | likely_pathogenic | 0.7813 | pathogenic | -0.463 | Destabilizing | 0.983 | D | 0.657 | neutral | None | None | None | None | I |
A/M | 0.944 | likely_pathogenic | 0.9187 | pathogenic | -0.393 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
A/N | 0.9946 | likely_pathogenic | 0.9945 | pathogenic | -1.052 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | I |
A/P | 0.9954 | likely_pathogenic | 0.9942 | pathogenic | -0.591 | Destabilizing | 0.999 | D | 0.79 | deleterious | D | 0.62045781 | None | None | I |
A/Q | 0.9923 | likely_pathogenic | 0.9922 | pathogenic | -1.266 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
A/R | 0.9956 | likely_pathogenic | 0.995 | pathogenic | -0.879 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
A/S | 0.5238 | ambiguous | 0.5214 | ambiguous | -1.35 | Destabilizing | 0.989 | D | 0.583 | neutral | D | 0.584997339 | None | None | I |
A/T | 0.7403 | likely_pathogenic | 0.7061 | pathogenic | -1.303 | Destabilizing | 0.989 | D | 0.667 | neutral | D | 0.619852397 | None | None | I |
A/V | 0.6428 | likely_pathogenic | 0.5674 | pathogenic | -0.591 | Destabilizing | 0.733 | D | 0.387 | neutral | N | 0.50087202 | None | None | I |
A/W | 0.9992 | likely_pathogenic | 0.9989 | pathogenic | -1.515 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
A/Y | 0.996 | likely_pathogenic | 0.9946 | pathogenic | -1.118 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.