Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17748 | 53467;53468;53469 | chr2:178607446;178607445;178607444 | chr2:179472173;179472172;179472171 |
N2AB | 16107 | 48544;48545;48546 | chr2:178607446;178607445;178607444 | chr2:179472173;179472172;179472171 |
N2A | 15180 | 45763;45764;45765 | chr2:178607446;178607445;178607444 | chr2:179472173;179472172;179472171 |
N2B | 8683 | 26272;26273;26274 | chr2:178607446;178607445;178607444 | chr2:179472173;179472172;179472171 |
Novex-1 | 8808 | 26647;26648;26649 | chr2:178607446;178607445;178607444 | chr2:179472173;179472172;179472171 |
Novex-2 | 8875 | 26848;26849;26850 | chr2:178607446;178607445;178607444 | chr2:179472173;179472172;179472171 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs1279556849 | -0.999 | 0.999 | D | 0.635 | 0.684 | 0.358948522604 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/D | rs1279556849 | -0.999 | 0.999 | D | 0.635 | 0.684 | 0.358948522604 | gnomAD-4.0.0 | 1.59247E-06 | None | None | None | None | I | None | 5.66572E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9907 | likely_pathogenic | 0.9903 | pathogenic | -0.415 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
N/C | 0.9557 | likely_pathogenic | 0.9573 | pathogenic | 0.222 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
N/D | 0.9822 | likely_pathogenic | 0.9836 | pathogenic | -1.012 | Destabilizing | 0.999 | D | 0.635 | neutral | D | 0.548638104 | None | None | I |
N/E | 0.9981 | likely_pathogenic | 0.9981 | pathogenic | -1.028 | Destabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | I |
N/F | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -0.908 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
N/G | 0.9806 | likely_pathogenic | 0.9806 | pathogenic | -0.587 | Destabilizing | 0.999 | D | 0.584 | neutral | None | None | None | None | I |
N/H | 0.9737 | likely_pathogenic | 0.971 | pathogenic | -0.816 | Destabilizing | 1.0 | D | 0.752 | deleterious | D | 0.549905552 | None | None | I |
N/I | 0.993 | likely_pathogenic | 0.992 | pathogenic | -0.038 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | D | 0.523660996 | None | None | I |
N/K | 0.9987 | likely_pathogenic | 0.9985 | pathogenic | 0.059 | Stabilizing | 1.0 | D | 0.747 | deleterious | D | 0.549398573 | None | None | I |
N/L | 0.9833 | likely_pathogenic | 0.9793 | pathogenic | -0.038 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
N/M | 0.9952 | likely_pathogenic | 0.9937 | pathogenic | 0.683 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
N/P | 0.9952 | likely_pathogenic | 0.9947 | pathogenic | -0.139 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
N/Q | 0.9979 | likely_pathogenic | 0.9977 | pathogenic | -0.763 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | I |
N/R | 0.997 | likely_pathogenic | 0.9965 | pathogenic | 0.226 | Stabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
N/S | 0.672 | likely_pathogenic | 0.6902 | pathogenic | -0.282 | Destabilizing | 0.999 | D | 0.6 | neutral | N | 0.501046836 | None | None | I |
N/T | 0.9386 | likely_pathogenic | 0.9419 | pathogenic | -0.174 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | D | 0.530787339 | None | None | I |
N/V | 0.9886 | likely_pathogenic | 0.9869 | pathogenic | -0.139 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
N/W | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -0.86 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
N/Y | 0.9931 | likely_pathogenic | 0.9918 | pathogenic | -0.529 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | D | 0.549905552 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.