Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17750 | 53473;53474;53475 | chr2:178607440;178607439;178607438 | chr2:179472167;179472166;179472165 |
N2AB | 16109 | 48550;48551;48552 | chr2:178607440;178607439;178607438 | chr2:179472167;179472166;179472165 |
N2A | 15182 | 45769;45770;45771 | chr2:178607440;178607439;178607438 | chr2:179472167;179472166;179472165 |
N2B | 8685 | 26278;26279;26280 | chr2:178607440;178607439;178607438 | chr2:179472167;179472166;179472165 |
Novex-1 | 8810 | 26653;26654;26655 | chr2:178607440;178607439;178607438 | chr2:179472167;179472166;179472165 |
Novex-2 | 8877 | 26854;26855;26856 | chr2:178607440;178607439;178607438 | chr2:179472167;179472166;179472165 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | rs1666217095 | None | 0.921 | N | 0.579 | 0.266 | 0.548822617668 | gnomAD-4.0.0 | 4.79106E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29807E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.3163 | likely_benign | 0.2818 | benign | -0.417 | Destabilizing | 0.027 | N | 0.288 | neutral | None | None | None | None | I |
C/D | 0.8294 | likely_pathogenic | 0.7925 | pathogenic | 0.186 | Stabilizing | 0.228 | N | 0.565 | neutral | None | None | None | None | I |
C/E | 0.8683 | likely_pathogenic | 0.8472 | pathogenic | 0.125 | Stabilizing | 0.228 | N | 0.561 | neutral | None | None | None | None | I |
C/F | 0.2552 | likely_benign | 0.2323 | benign | -0.676 | Destabilizing | 0.794 | D | 0.575 | neutral | N | 0.362493889 | None | None | I |
C/G | 0.2218 | likely_benign | 0.1988 | benign | -0.457 | Destabilizing | 0.047 | N | 0.613 | neutral | N | 0.41805917 | None | None | I |
C/H | 0.5138 | ambiguous | 0.4852 | ambiguous | -0.354 | Destabilizing | 0.836 | D | 0.555 | neutral | None | None | None | None | I |
C/I | 0.6332 | likely_pathogenic | 0.5765 | pathogenic | -0.399 | Destabilizing | 0.593 | D | 0.487 | neutral | None | None | None | None | I |
C/K | 0.8739 | likely_pathogenic | 0.852 | pathogenic | 0.065 | Stabilizing | 0.129 | N | 0.569 | neutral | None | None | None | None | I |
C/L | 0.5309 | ambiguous | 0.5139 | ambiguous | -0.399 | Destabilizing | 0.228 | N | 0.549 | neutral | None | None | None | None | I |
C/M | 0.6497 | likely_pathogenic | 0.6272 | pathogenic | -0.175 | Destabilizing | 0.94 | D | 0.504 | neutral | None | None | None | None | I |
C/N | 0.5276 | ambiguous | 0.5163 | ambiguous | 0.364 | Stabilizing | 0.129 | N | 0.555 | neutral | None | None | None | None | I |
C/P | 0.9755 | likely_pathogenic | 0.9716 | pathogenic | -0.388 | Destabilizing | 0.593 | D | 0.563 | neutral | None | None | None | None | I |
C/Q | 0.703 | likely_pathogenic | 0.667 | pathogenic | 0.189 | Stabilizing | 0.418 | N | 0.551 | neutral | None | None | None | None | I |
C/R | 0.6081 | likely_pathogenic | 0.5531 | ambiguous | 0.364 | Stabilizing | 0.351 | N | 0.561 | neutral | N | 0.448728794 | None | None | I |
C/S | 0.1819 | likely_benign | 0.1618 | benign | -0.005 | Destabilizing | 0.001 | N | 0.353 | neutral | N | 0.360339018 | None | None | I |
C/T | 0.4228 | ambiguous | 0.369 | ambiguous | 0.016 | Stabilizing | 0.061 | N | 0.523 | neutral | None | None | None | None | I |
C/V | 0.465 | ambiguous | 0.4203 | ambiguous | -0.388 | Destabilizing | 0.228 | N | 0.503 | neutral | None | None | None | None | I |
C/W | 0.601 | likely_pathogenic | 0.5529 | ambiguous | -0.678 | Destabilizing | 0.978 | D | 0.574 | neutral | N | 0.46793063 | None | None | I |
C/Y | 0.384 | ambiguous | 0.3588 | ambiguous | -0.485 | Destabilizing | 0.921 | D | 0.579 | neutral | N | 0.393528872 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.