Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17755 | 53488;53489;53490 | chr2:178607425;178607424;178607423 | chr2:179472152;179472151;179472150 |
N2AB | 16114 | 48565;48566;48567 | chr2:178607425;178607424;178607423 | chr2:179472152;179472151;179472150 |
N2A | 15187 | 45784;45785;45786 | chr2:178607425;178607424;178607423 | chr2:179472152;179472151;179472150 |
N2B | 8690 | 26293;26294;26295 | chr2:178607425;178607424;178607423 | chr2:179472152;179472151;179472150 |
Novex-1 | 8815 | 26668;26669;26670 | chr2:178607425;178607424;178607423 | chr2:179472152;179472151;179472150 |
Novex-2 | 8882 | 26869;26870;26871 | chr2:178607425;178607424;178607423 | chr2:179472152;179472151;179472150 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs777396852 | 0.161 | 1.0 | N | 0.719 | 0.436 | 0.659072316242 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6282 | likely_pathogenic | 0.5307 | ambiguous | -0.617 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
A/D | 0.8625 | likely_pathogenic | 0.6979 | pathogenic | -0.127 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
A/E | 0.8096 | likely_pathogenic | 0.6521 | pathogenic | -0.163 | Destabilizing | 1.0 | D | 0.853 | deleterious | N | 0.512838988 | None | None | I |
A/F | 0.6432 | likely_pathogenic | 0.5093 | ambiguous | -0.539 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | I |
A/G | 0.2957 | likely_benign | 0.1879 | benign | -0.578 | Destabilizing | 1.0 | D | 0.623 | neutral | N | 0.493231336 | None | None | I |
A/H | 0.8608 | likely_pathogenic | 0.765 | pathogenic | -0.447 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
A/I | 0.556 | ambiguous | 0.4283 | ambiguous | -0.003 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
A/K | 0.9013 | likely_pathogenic | 0.8056 | pathogenic | -0.532 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
A/L | 0.4536 | ambiguous | 0.3273 | benign | -0.003 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
A/M | 0.5443 | ambiguous | 0.4259 | ambiguous | -0.297 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
A/N | 0.8029 | likely_pathogenic | 0.6592 | pathogenic | -0.378 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | I |
A/P | 0.9818 | likely_pathogenic | 0.9408 | pathogenic | -0.089 | Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.529693335 | None | None | I |
A/Q | 0.7475 | likely_pathogenic | 0.6239 | pathogenic | -0.465 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
A/R | 0.8473 | likely_pathogenic | 0.7244 | pathogenic | -0.265 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | I |
A/S | 0.1877 | likely_benign | 0.1494 | benign | -0.739 | Destabilizing | 1.0 | D | 0.631 | neutral | N | 0.518071449 | None | None | I |
A/T | 0.2113 | likely_benign | 0.1547 | benign | -0.661 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.507547811 | None | None | I |
A/V | 0.2819 | likely_benign | 0.2097 | benign | -0.089 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.510222757 | None | None | I |
A/W | 0.9492 | likely_pathogenic | 0.8937 | pathogenic | -0.817 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | I |
A/Y | 0.8309 | likely_pathogenic | 0.7317 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.