Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17757 | 53494;53495;53496 | chr2:178607419;178607418;178607417 | chr2:179472146;179472145;179472144 |
N2AB | 16116 | 48571;48572;48573 | chr2:178607419;178607418;178607417 | chr2:179472146;179472145;179472144 |
N2A | 15189 | 45790;45791;45792 | chr2:178607419;178607418;178607417 | chr2:179472146;179472145;179472144 |
N2B | 8692 | 26299;26300;26301 | chr2:178607419;178607418;178607417 | chr2:179472146;179472145;179472144 |
Novex-1 | 8817 | 26674;26675;26676 | chr2:178607419;178607418;178607417 | chr2:179472146;179472145;179472144 |
Novex-2 | 8884 | 26875;26876;26877 | chr2:178607419;178607418;178607417 | chr2:179472146;179472145;179472144 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1351014934 | None | None | N | 0.141 | 0.109 | 0.193865811164 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/V | rs1351014934 | None | None | N | 0.141 | 0.109 | 0.193865811164 | gnomAD-4.0.0 | 3.72001E-06 | None | None | None | None | N | None | 1.33629E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 4.23965E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4153 | ambiguous | 0.4108 | ambiguous | -0.9 | Destabilizing | 0.001 | N | 0.372 | neutral | None | None | None | None | N |
A/D | 0.9611 | likely_pathogenic | 0.9226 | pathogenic | -1.076 | Destabilizing | 0.055 | N | 0.747 | deleterious | D | 0.526885859 | None | None | N |
A/E | 0.9107 | likely_pathogenic | 0.8192 | pathogenic | -1.002 | Destabilizing | 0.072 | N | 0.715 | prob.delet. | None | None | None | None | N |
A/F | 0.674 | likely_pathogenic | 0.5618 | ambiguous | -0.649 | Destabilizing | 0.214 | N | 0.773 | deleterious | None | None | None | None | N |
A/G | 0.4082 | ambiguous | 0.3642 | ambiguous | -1.171 | Destabilizing | 0.055 | N | 0.544 | neutral | N | 0.519634461 | None | None | N |
A/H | 0.9296 | likely_pathogenic | 0.876 | pathogenic | -1.42 | Destabilizing | 0.864 | D | 0.732 | prob.delet. | None | None | None | None | N |
A/I | 0.2807 | likely_benign | 0.2222 | benign | 0.106 | Stabilizing | 0.006 | N | 0.623 | neutral | None | None | None | None | N |
A/K | 0.9485 | likely_pathogenic | 0.8928 | pathogenic | -1.098 | Destabilizing | 0.072 | N | 0.715 | prob.delet. | None | None | None | None | N |
A/L | 0.3179 | likely_benign | 0.2426 | benign | 0.106 | Stabilizing | 0.016 | N | 0.599 | neutral | None | None | None | None | N |
A/M | 0.3523 | ambiguous | 0.2848 | benign | -0.062 | Destabilizing | 0.214 | N | 0.743 | deleterious | None | None | None | None | N |
A/N | 0.8227 | likely_pathogenic | 0.738 | pathogenic | -1.024 | Destabilizing | 0.214 | N | 0.776 | deleterious | None | None | None | None | N |
A/P | 0.9337 | likely_pathogenic | 0.8771 | pathogenic | -0.15 | Destabilizing | 0.295 | N | 0.766 | deleterious | D | 0.526885859 | None | None | N |
A/Q | 0.8648 | likely_pathogenic | 0.7675 | pathogenic | -0.993 | Destabilizing | 0.356 | N | 0.763 | deleterious | None | None | None | None | N |
A/R | 0.9183 | likely_pathogenic | 0.844 | pathogenic | -0.996 | Destabilizing | 0.214 | N | 0.77 | deleterious | None | None | None | None | N |
A/S | 0.2137 | likely_benign | 0.1943 | benign | -1.48 | Destabilizing | 0.012 | N | 0.519 | neutral | D | 0.536275995 | None | None | N |
A/T | 0.0825 | likely_benign | 0.0825 | benign | -1.278 | Destabilizing | None | N | 0.138 | neutral | N | 0.488695478 | None | None | N |
A/V | 0.1268 | likely_benign | 0.1018 | benign | -0.15 | Destabilizing | None | N | 0.141 | neutral | N | 0.423334491 | None | None | N |
A/W | 0.9571 | likely_pathogenic | 0.9231 | pathogenic | -1.165 | Destabilizing | 0.864 | D | 0.753 | deleterious | None | None | None | None | N |
A/Y | 0.8824 | likely_pathogenic | 0.8186 | pathogenic | -0.65 | Destabilizing | 0.356 | N | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.