Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17759 | 53500;53501;53502 | chr2:178607413;178607412;178607411 | chr2:179472140;179472139;179472138 |
N2AB | 16118 | 48577;48578;48579 | chr2:178607413;178607412;178607411 | chr2:179472140;179472139;179472138 |
N2A | 15191 | 45796;45797;45798 | chr2:178607413;178607412;178607411 | chr2:179472140;179472139;179472138 |
N2B | 8694 | 26305;26306;26307 | chr2:178607413;178607412;178607411 | chr2:179472140;179472139;179472138 |
Novex-1 | 8819 | 26680;26681;26682 | chr2:178607413;178607412;178607411 | chr2:179472140;179472139;179472138 |
Novex-2 | 8886 | 26881;26882;26883 | chr2:178607413;178607412;178607411 | chr2:179472140;179472139;179472138 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs752508699 | -0.671 | 0.863 | N | 0.611 | 0.187 | 0.229264304666 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/L | rs752508699 | -0.671 | 0.863 | N | 0.611 | 0.187 | 0.229264304666 | gnomAD-4.0.0 | 1.59268E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43316E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8157 | likely_pathogenic | 0.7764 | pathogenic | -2.342 | Highly Destabilizing | 0.046 | N | 0.337 | neutral | N | 0.505835186 | None | None | N |
V/C | 0.9588 | likely_pathogenic | 0.9513 | pathogenic | -1.8 | Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
V/D | 0.9982 | likely_pathogenic | 0.9979 | pathogenic | -3.173 | Highly Destabilizing | 0.993 | D | 0.841 | deleterious | None | None | None | None | N |
V/E | 0.9949 | likely_pathogenic | 0.9943 | pathogenic | -2.945 | Highly Destabilizing | 0.982 | D | 0.815 | deleterious | D | 0.52444642 | None | None | N |
V/F | 0.916 | likely_pathogenic | 0.8763 | pathogenic | -1.413 | Destabilizing | 0.993 | D | 0.777 | deleterious | None | None | None | None | N |
V/G | 0.9066 | likely_pathogenic | 0.8957 | pathogenic | -2.884 | Highly Destabilizing | 0.964 | D | 0.789 | deleterious | D | 0.52444642 | None | None | N |
V/H | 0.9989 | likely_pathogenic | 0.9986 | pathogenic | -2.664 | Highly Destabilizing | 0.999 | D | 0.822 | deleterious | None | None | None | None | N |
V/I | 0.1604 | likely_benign | 0.1462 | benign | -0.81 | Destabilizing | 0.863 | D | 0.553 | neutral | N | 0.461531919 | None | None | N |
V/K | 0.9963 | likely_pathogenic | 0.9963 | pathogenic | -2.065 | Highly Destabilizing | 0.986 | D | 0.814 | deleterious | None | None | None | None | N |
V/L | 0.8043 | likely_pathogenic | 0.7672 | pathogenic | -0.81 | Destabilizing | 0.863 | D | 0.611 | neutral | N | 0.46729418 | None | None | N |
V/M | 0.8522 | likely_pathogenic | 0.8062 | pathogenic | -0.786 | Destabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/N | 0.9955 | likely_pathogenic | 0.9944 | pathogenic | -2.424 | Highly Destabilizing | 0.993 | D | 0.83 | deleterious | None | None | None | None | N |
V/P | 0.9933 | likely_pathogenic | 0.9921 | pathogenic | -1.297 | Destabilizing | 0.993 | D | 0.822 | deleterious | None | None | None | None | N |
V/Q | 0.9948 | likely_pathogenic | 0.9942 | pathogenic | -2.258 | Highly Destabilizing | 0.993 | D | 0.811 | deleterious | None | None | None | None | N |
V/R | 0.9925 | likely_pathogenic | 0.9921 | pathogenic | -1.83 | Destabilizing | 0.993 | D | 0.821 | deleterious | None | None | None | None | N |
V/S | 0.9761 | likely_pathogenic | 0.9697 | pathogenic | -2.999 | Highly Destabilizing | 0.973 | D | 0.788 | deleterious | None | None | None | None | N |
V/T | 0.8775 | likely_pathogenic | 0.8675 | pathogenic | -2.636 | Highly Destabilizing | 0.953 | D | 0.606 | neutral | None | None | None | None | N |
V/W | 0.9988 | likely_pathogenic | 0.9983 | pathogenic | -2.015 | Highly Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
V/Y | 0.9947 | likely_pathogenic | 0.9926 | pathogenic | -1.658 | Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.