Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17760 | 53503;53504;53505 | chr2:178607410;178607409;178607408 | chr2:179472137;179472136;179472135 |
N2AB | 16119 | 48580;48581;48582 | chr2:178607410;178607409;178607408 | chr2:179472137;179472136;179472135 |
N2A | 15192 | 45799;45800;45801 | chr2:178607410;178607409;178607408 | chr2:179472137;179472136;179472135 |
N2B | 8695 | 26308;26309;26310 | chr2:178607410;178607409;178607408 | chr2:179472137;179472136;179472135 |
Novex-1 | 8820 | 26683;26684;26685 | chr2:178607410;178607409;178607408 | chr2:179472137;179472136;179472135 |
Novex-2 | 8887 | 26884;26885;26886 | chr2:178607410;178607409;178607408 | chr2:179472137;179472136;179472135 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs2055156080 | None | 0.994 | N | 0.604 | 0.535 | 0.549078225428 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | None | None | 0.989 | N | 0.516 | 0.355 | 0.273503213844 | gnomAD-4.0.0 | 1.5927E-06 | None | None | None | None | N | None | 5.66829E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4617 | ambiguous | 0.5033 | ambiguous | -0.863 | Destabilizing | 0.994 | D | 0.547 | neutral | N | 0.46746927 | None | None | N |
E/C | 0.9598 | likely_pathogenic | 0.9677 | pathogenic | -0.621 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/D | 0.1876 | likely_benign | 0.2164 | benign | -1.334 | Destabilizing | 0.217 | N | 0.333 | neutral | N | 0.41221342 | None | None | N |
E/F | 0.9326 | likely_pathogenic | 0.9426 | pathogenic | -0.09 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/G | 0.6995 | likely_pathogenic | 0.7313 | pathogenic | -1.286 | Destabilizing | 0.994 | D | 0.604 | neutral | N | 0.482766797 | None | None | N |
E/H | 0.8104 | likely_pathogenic | 0.8355 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.532 | neutral | None | None | None | None | N |
E/I | 0.6728 | likely_pathogenic | 0.7045 | pathogenic | 0.314 | Stabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
E/K | 0.6123 | likely_pathogenic | 0.6274 | pathogenic | -1.104 | Destabilizing | 0.978 | D | 0.483 | neutral | N | 0.392720796 | None | None | N |
E/L | 0.7749 | likely_pathogenic | 0.8017 | pathogenic | 0.314 | Stabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/M | 0.7853 | likely_pathogenic | 0.7926 | pathogenic | 0.814 | Stabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/N | 0.5078 | ambiguous | 0.5585 | ambiguous | -1.555 | Destabilizing | 0.998 | D | 0.549 | neutral | None | None | None | None | N |
E/P | 0.9923 | likely_pathogenic | 0.9926 | pathogenic | -0.057 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
E/Q | 0.4113 | ambiguous | 0.4278 | ambiguous | -1.349 | Destabilizing | 0.989 | D | 0.516 | neutral | N | 0.432297904 | None | None | N |
E/R | 0.7199 | likely_pathogenic | 0.7442 | pathogenic | -0.771 | Destabilizing | 0.46 | N | 0.289 | neutral | None | None | None | None | N |
E/S | 0.5045 | ambiguous | 0.5431 | ambiguous | -1.968 | Destabilizing | 0.992 | D | 0.507 | neutral | None | None | None | None | N |
E/T | 0.4886 | ambiguous | 0.5259 | ambiguous | -1.616 | Destabilizing | 0.999 | D | 0.604 | neutral | None | None | None | None | N |
E/V | 0.4605 | ambiguous | 0.4831 | ambiguous | -0.057 | Destabilizing | 0.998 | D | 0.702 | prob.neutral | N | 0.443901764 | None | None | N |
E/W | 0.9767 | likely_pathogenic | 0.9795 | pathogenic | 0.111 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/Y | 0.8867 | likely_pathogenic | 0.9061 | pathogenic | 0.131 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.