Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17769 | 53530;53531;53532 | chr2:178607297;178607296;178607295 | chr2:179472024;179472023;179472022 |
N2AB | 16128 | 48607;48608;48609 | chr2:178607297;178607296;178607295 | chr2:179472024;179472023;179472022 |
N2A | 15201 | 45826;45827;45828 | chr2:178607297;178607296;178607295 | chr2:179472024;179472023;179472022 |
N2B | 8704 | 26335;26336;26337 | chr2:178607297;178607296;178607295 | chr2:179472024;179472023;179472022 |
Novex-1 | 8829 | 26710;26711;26712 | chr2:178607297;178607296;178607295 | chr2:179472024;179472023;179472022 |
Novex-2 | 8896 | 26911;26912;26913 | chr2:178607297;178607296;178607295 | chr2:179472024;179472023;179472022 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs759317677 | -1.504 | 0.001 | N | 0.224 | 0.052 | 0.17948927462 | gnomAD-2.1.1 | 2.02E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.63773E-04 | None | 0 | 0 | 0 |
L/V | rs759317677 | -1.504 | 0.001 | N | 0.224 | 0.052 | 0.17948927462 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07297E-04 | 0 |
L/V | rs759317677 | -1.504 | 0.001 | N | 0.224 | 0.052 | 0.17948927462 | gnomAD-4.0.0 | 1.30233E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.08819E-04 | 3.20636E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2112 | likely_benign | 0.2077 | benign | -1.249 | Destabilizing | 0.116 | N | 0.393 | neutral | None | None | None | None | N |
L/C | 0.4428 | ambiguous | 0.4439 | ambiguous | -0.732 | Destabilizing | 0.944 | D | 0.494 | neutral | None | None | None | None | N |
L/D | 0.7814 | likely_pathogenic | 0.7771 | pathogenic | -0.648 | Destabilizing | 0.69 | D | 0.565 | neutral | None | None | None | None | N |
L/E | 0.3226 | likely_benign | 0.3093 | benign | -0.688 | Destabilizing | 0.69 | D | 0.55 | neutral | None | None | None | None | N |
L/F | 0.2719 | likely_benign | 0.2385 | benign | -0.934 | Destabilizing | 0.627 | D | 0.488 | neutral | N | 0.468388337 | None | None | N |
L/G | 0.4961 | ambiguous | 0.4931 | ambiguous | -1.517 | Destabilizing | 0.69 | D | 0.52 | neutral | None | None | None | None | N |
L/H | 0.2979 | likely_benign | 0.2606 | benign | -0.705 | Destabilizing | 0.975 | D | 0.601 | neutral | N | 0.495132221 | None | None | N |
L/I | 0.0977 | likely_benign | 0.0947 | benign | -0.617 | Destabilizing | 0.033 | N | 0.443 | neutral | N | 0.493918713 | None | None | N |
L/K | 0.1484 | likely_benign | 0.1443 | benign | -0.816 | Destabilizing | 0.69 | D | 0.508 | neutral | None | None | None | None | N |
L/M | 0.1148 | likely_benign | 0.1158 | benign | -0.481 | Destabilizing | 0.69 | D | 0.51 | neutral | None | None | None | None | N |
L/N | 0.3965 | ambiguous | 0.4003 | ambiguous | -0.571 | Destabilizing | 0.69 | D | 0.57 | neutral | None | None | None | None | N |
L/P | 0.8765 | likely_pathogenic | 0.8652 | pathogenic | -0.795 | Destabilizing | 0.773 | D | 0.569 | neutral | N | 0.494612146 | None | None | N |
L/Q | 0.1209 | likely_benign | 0.107 | benign | -0.778 | Destabilizing | 0.818 | D | 0.542 | neutral | None | None | None | None | N |
L/R | 0.1409 | likely_benign | 0.1259 | benign | -0.195 | Destabilizing | 0.627 | D | 0.547 | neutral | N | 0.446050195 | None | None | N |
L/S | 0.2795 | likely_benign | 0.2501 | benign | -1.123 | Destabilizing | 0.241 | N | 0.409 | neutral | None | None | None | None | N |
L/T | 0.1361 | likely_benign | 0.1354 | benign | -1.047 | Destabilizing | 0.004 | N | 0.278 | neutral | None | None | None | None | N |
L/V | 0.086 | likely_benign | 0.0829 | benign | -0.795 | Destabilizing | 0.001 | N | 0.224 | neutral | N | 0.428579155 | None | None | N |
L/W | 0.4846 | ambiguous | 0.4311 | ambiguous | -0.965 | Destabilizing | 0.981 | D | 0.607 | neutral | None | None | None | None | N |
L/Y | 0.5044 | ambiguous | 0.4863 | ambiguous | -0.749 | Destabilizing | 0.818 | D | 0.489 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.