Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1776953530;53531;53532 chr2:178607297;178607296;178607295chr2:179472024;179472023;179472022
N2AB1612848607;48608;48609 chr2:178607297;178607296;178607295chr2:179472024;179472023;179472022
N2A1520145826;45827;45828 chr2:178607297;178607296;178607295chr2:179472024;179472023;179472022
N2B870426335;26336;26337 chr2:178607297;178607296;178607295chr2:179472024;179472023;179472022
Novex-1882926710;26711;26712 chr2:178607297;178607296;178607295chr2:179472024;179472023;179472022
Novex-2889626911;26912;26913 chr2:178607297;178607296;178607295chr2:179472024;179472023;179472022
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-17
  • Domain position: 6
  • Structural Position: 6
  • Q(SASA): 0.2402
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/V rs759317677 -1.504 0.001 N 0.224 0.052 0.17948927462 gnomAD-2.1.1 2.02E-05 None None None None N None 0 0 None 0 0 None 1.63773E-04 None 0 0 0
L/V rs759317677 -1.504 0.001 N 0.224 0.052 0.17948927462 gnomAD-3.1.2 6.58E-06 None None None None N None 0 0 0 0 0 None 0 0 0 2.07297E-04 0
L/V rs759317677 -1.504 0.001 N 0.224 0.052 0.17948927462 gnomAD-4.0.0 1.30233E-05 None None None None N None 0 0 None 0 0 None 0 0 0 2.08819E-04 3.20636E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2112 likely_benign 0.2077 benign -1.249 Destabilizing 0.116 N 0.393 neutral None None None None N
L/C 0.4428 ambiguous 0.4439 ambiguous -0.732 Destabilizing 0.944 D 0.494 neutral None None None None N
L/D 0.7814 likely_pathogenic 0.7771 pathogenic -0.648 Destabilizing 0.69 D 0.565 neutral None None None None N
L/E 0.3226 likely_benign 0.3093 benign -0.688 Destabilizing 0.69 D 0.55 neutral None None None None N
L/F 0.2719 likely_benign 0.2385 benign -0.934 Destabilizing 0.627 D 0.488 neutral N 0.468388337 None None N
L/G 0.4961 ambiguous 0.4931 ambiguous -1.517 Destabilizing 0.69 D 0.52 neutral None None None None N
L/H 0.2979 likely_benign 0.2606 benign -0.705 Destabilizing 0.975 D 0.601 neutral N 0.495132221 None None N
L/I 0.0977 likely_benign 0.0947 benign -0.617 Destabilizing 0.033 N 0.443 neutral N 0.493918713 None None N
L/K 0.1484 likely_benign 0.1443 benign -0.816 Destabilizing 0.69 D 0.508 neutral None None None None N
L/M 0.1148 likely_benign 0.1158 benign -0.481 Destabilizing 0.69 D 0.51 neutral None None None None N
L/N 0.3965 ambiguous 0.4003 ambiguous -0.571 Destabilizing 0.69 D 0.57 neutral None None None None N
L/P 0.8765 likely_pathogenic 0.8652 pathogenic -0.795 Destabilizing 0.773 D 0.569 neutral N 0.494612146 None None N
L/Q 0.1209 likely_benign 0.107 benign -0.778 Destabilizing 0.818 D 0.542 neutral None None None None N
L/R 0.1409 likely_benign 0.1259 benign -0.195 Destabilizing 0.627 D 0.547 neutral N 0.446050195 None None N
L/S 0.2795 likely_benign 0.2501 benign -1.123 Destabilizing 0.241 N 0.409 neutral None None None None N
L/T 0.1361 likely_benign 0.1354 benign -1.047 Destabilizing 0.004 N 0.278 neutral None None None None N
L/V 0.086 likely_benign 0.0829 benign -0.795 Destabilizing 0.001 N 0.224 neutral N 0.428579155 None None N
L/W 0.4846 ambiguous 0.4311 ambiguous -0.965 Destabilizing 0.981 D 0.607 neutral None None None None N
L/Y 0.5044 ambiguous 0.4863 ambiguous -0.749 Destabilizing 0.818 D 0.489 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.